Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene94589 SustainPine v3.0 833
• AutoFact: putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana] dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 3.213e-13
Putative Complete
sp_v3.0_unigene94809 SustainPine v3.0 818
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.544e-20
Putative Complete
sp_v3.0_unigene96463 SustainPine v3.0 545
• AutoFact: Unassigned protein 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene97675 SustainPine v3.0 386
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene98089 SustainPine v3.0 416
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 6.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene98141 SustainPine v3.0 999
• AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 5.992e-08
C-terminus
sp_v3.0_unigene98265 SustainPine v3.0 465
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 4.0e-09
• FL-Next: sp=Transcription factor bHLH10; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene98620 SustainPine v3.0 301
• AutoFact: Putative bHLH transcription factor PTF1 n=2 Tax=Oryza sativa RepID=Q6Z7E7_ORYSJ 2.0e-06
• FL-Next: sp=Transcription factor bHLH69; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Os02g0564700 protein 5.361e-06
Internal
sp_v3.0_unigene99279 SustainPine v3.0 655
• AutoFact: similar to MYC transcription factor; K13422 transcription factor MYC2 5.0e-22
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Internal
sp_v3.0_unigene99942 SustainPine v3.0 659
• AutoFact: Transcription factor SCREAM2 n=2 Tax=Arabidopsis RepID=SCRM2_ARATH 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inducer of CBF expression 1 4.796e-12
C-terminus
sp_v3.0_unigene100092 SustainPine v3.0 305
• AutoFact: Unassigned protein 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene101616 SustainPine v3.0 399
• AutoFact: basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] ref|XP_002893369.1| hypothetical protein ARALYDRAFT_472704 [Arabidopsis lyrata subsp. lyrata] dbj|BAC43682.1| unknown protein [Arabidopsis thaliana] gb|AAO42932.1| At1g26948 [Arabidop 4.0e-17
• FL-Next: sp=Transcription factor bHLH135; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcription regulator, putative 3.728e-11
N-terminus
sp_v3.0_unigene101695 SustainPine v3.0 492
• AutoFact: Unassigned protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene102445 SustainPine v3.0 603
• AutoFact: Unassigned protein 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102446 SustainPine v3.0 315
• AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.574e-19
Internal
sp_v3.0_unigene102855 SustainPine v3.0 735
• AutoFact: APO protein 3 [Arabidopsis thaliana] ref|NP_001119475.1| APO protein 3 [Arabidopsis thaliana] sp|Q9FH50.1|APO3_ARATH RecName: Full=APO protein 3, mitochondrial; Flags: Precursor dbj|BAB08879.1| unnamed protein product [Arabidopsis thaliana] gb|AED97538.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: APO protein 3, mitochondrial, putative 4.296e-09
C-terminus
sp_v3.0_unigene103560 SustainPine v3.0 461
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWI9_RICCO 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 4.52e-14
Internal
sp_v3.0_unigene103571 SustainPine v3.0 223
• AutoFact: BHLH domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIP2_MALDO 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104006 SustainPine v3.0 703
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 7.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene104862 SustainPine v3.0 489
• AutoFact: Unassigned protein
• FL-Next: sp=Transcription factor LHW; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain