Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene52482 SustainPine v3.0 232
AutoFact: transcription factor bHLH137 [Arabidopsis thaliana] ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana] sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic helix-loop-helix protein 137; Short=AtbHLH137; 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor GBOF-1 3.1e-07
Internal
sp_v3.0_unigene53195 SustainPine v3.0 126
AutoFact: Unassigned protein 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53256 SustainPine v3.0 282
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene54971 SustainPine v3.0 175
AutoFact: DUF794 domain containing protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene55425 SustainPine v3.0 324
AutoFact: Unassigned protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene55661 SustainPine v3.0 456
AutoFact: DNA binding protein n=3 Tax=Zea mays RepID=B6TIA0_MAIZE 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene55964 SustainPine v3.0 215
AutoFact: Unassigned protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene56307 SustainPine v3.0 125
AutoFact: Unassigned protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56440 SustainPine v3.0 183
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene57030 SustainPine v3.0 367
AutoFact: Helix-loop-helix DNA-binding n=2 Tax=Medicago truncatula RepID=Q2HVX8_MEDTR 4.0e-19
FL-Next: sp=Transcription factor LHW; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene58916 SustainPine v3.0 191
AutoFact: Unassigned protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene59655 SustainPine v3.0 410
AutoFact: transcription factor bHLH77 [Arabidopsis thaliana] sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH 77; AltName: Full=Transcription factor EN 87; AltName: Full=b 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 6.581e-13
Internal
sp_v3.0_unigene59727 SustainPine v3.0 476
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 2.045e-12
Internal
sp_v3.0_unigene59932 SustainPine v3.0 391
AutoFact: pfam00665, rve, Integrase core domain 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene60140 SustainPine v3.0 348
AutoFact: Helix-loop-helix DNA-binding n=2 Tax=Medicago truncatula RepID=Q2HVX8_MEDTR 3.0e-38
FL-Next: sp=Transcription factor LHW; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61867 SustainPine v3.0 254
AutoFact: Transcription factor bHLH71 n=3 Tax=Arabidopsis RepID=BH071_ARATH 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62684 SustainPine v3.0 144
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64289 SustainPine v3.0 162
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65099 SustainPine v3.0 217
AutoFact: Unassigned protein 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene65388 SustainPine v3.0 255
AutoFact: Unassigned protein 2.0e-33
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.126e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain