Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene22236 SustainPine v3.0 756
AutoFact: Unassigned protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22828 SustainPine v3.0 820
AutoFact: Unassigned protein
FL-Next: sp=Transcription factor BIM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene24739 SustainPine v3.0 2236
AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
FL-Next: sp=Transcription factor bHLH130; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BHLH transcription factor 8.787e-13
Complete
sp_v3.0_unigene26097 SustainPine v3.0 3688
AutoFact: phaseolin G-box binding protein PG1 [Phaseolus vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene26938 SustainPine v3.0 479
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene27972 SustainPine v3.0 777
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene28087 SustainPine v3.0 746
AutoFact: Unassigned protein 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene28339 SustainPine v3.0 958
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_89.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SMT7_VITVI 0.0
FL-Next: sp=Reticuline oxidase-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Reticuline oxidase, putative 3.063e-30
Putative C-terminus
sp_v3.0_unigene28658 SustainPine v3.0 2149
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: At4g36060-like protein 3.211e-07
Complete
sp_v3.0_unigene29393 SustainPine v3.0 535
AutoFact: transcription factor bHLH95 [Arabidopsis thaliana] sp|Q9FXA3.2|BH095_ARATH RecName: Full=Transcription factor bHLH95; AltName: Full=Basic helix-loop-helix protein 95; Short=AtbHLH95; Short=bHLH 95; AltName: Full=Protein RETARDED GROWTH OF EMBRYO 1; AltNam 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene29526 SustainPine v3.0 776
AutoFact: Transcription factor ICE1, putative n=1 Tax=Ricinus communis RepID=B9RA76_RICCO 8.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene29791 SustainPine v3.0 882
AutoFact: basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] ref|XP_002893369.1| hypothetical protein ARALYDRAFT_472704 [Arabidopsis lyrata subsp. lyrata] dbj|BAC43682.1| unknown protein [Arabidopsis thaliana] gb|AAO42932.1| At1g26948 [Arabidop 1.0e-23
FL-Next: sp=Transcription factor bHLH135; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcription regulator, putative 9.213e-11
Complete
sp_v3.0_unigene29834 SustainPine v3.0 947
AutoFact: serine/arginine repetitive matrix 2, isoform CRA_e [Homo sapiens] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29862 SustainPine v3.0 1019
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene29985 SustainPine v3.0 2518
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor GBOF-1 6.026e-10
Complete
sp_v3.0_unigene30703 SustainPine v3.0 1159
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30934 SustainPine v3.0 2027
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ER33 protein 5.567e-15
Complete
sp_v3.0_unigene33100 SustainPine v3.0 926
AutoFact: Helix-loop-helix DNA-binding n=1 Tax=Medicago truncatula RepID=Q2HTT3_MEDTR 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33299 SustainPine v3.0 798
AutoFact: HLH domain containing protein 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene33854 SustainPine v3.0 751
AutoFact: Unassigned protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain