Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene164940 SustainPine v3.0 375
• AutoFact: bHLH transcription factor PTF1 [Zea mays] gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 3.949e-20
Internal
sp_v3.0_unigene164973 SustainPine v3.0 189
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative anthocyanin transcriptional regulator 1.239e-24
Internal
sp_v3.0_unigene165270 SustainPine v3.0 218
• AutoFact: MYC n=1 Tax=Brassica oleracea var. gemmifera RepID=B1N8M0_BRAOG 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene166658 SustainPine v3.0 220
• AutoFact: Unassigned protein 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene166667 SustainPine v3.0 230
• AutoFact: Unassigned protein 5.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166998 SustainPine v3.0 185
• AutoFact: Inducer of CBF expression 2 n=2 Tax=Andropogoneae RepID=B6UB60_MAIZE 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inducer of CBF expression 1 protein 3.331e-08
N-terminus
sp_v3.0_unigene167476 SustainPine v3.0 162
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inducer of CBF expression 1 protein 2.885e-08
N-terminus
sp_v3.0_unigene167945 SustainPine v3.0 164
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9T7X6_RICCO 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.155e-06
Internal
sp_v3.0_unigene183900 SustainPine v3.0 325
• AutoFact: MYC transcription factor [Solanum tuberosum] 4.0e-34
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
• Sma3: DNA binding protein, putative 4.749e-08
Internal
sp_v3.0_unigene184675 SustainPine v3.0 275
• AutoFact: Unassigned protein 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene185811 SustainPine v3.0 456
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene194467 SustainPine v3.0 458
• AutoFact: putative basic-helix-loop-helix transcription factor [Oryza sativa Japonica Group] gb|EAZ24247.1| hypothetical protein OsJ_07997 [Oryza sativa Japonica Group] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene194804 SustainPine v3.0 400
• AutoFact: DNA binding protein n=1 Tax=Zea mays RepID=B6STU1_MAIZE 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 8.01e-08
C-terminus
sp_v3.0_unigene195442 SustainPine v3.0 258
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWI9_RICCO 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 4.054e-11
Internal
sp_v3.0_unigene196731 SustainPine v3.0 492
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene197728 SustainPine v3.0 622
• AutoFact: aprataxin [Arabidopsis thaliana] sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic helix-loop-helix protein 140; Short=AtbHLH140; Short=bHLH 140; AltName: Full=Transcription factor EN 122; AltName: Full=bHLH transcrip 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene198706 SustainPine v3.0 218
• AutoFact: APO protein 3 [Arabidopsis thaliana] ref|NP_001119475.1| APO protein 3 [Arabidopsis thaliana] sp|Q9FH50.1|APO3_ARATH RecName: Full=APO protein 3, mitochondrial; Flags: Precursor dbj|BAB08879.1| unnamed protein product [Arabidopsis thaliana] gb|AED97538.1| 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene198835 SustainPine v3.0 362
• AutoFact: bHLH transcription factor-like protein [Oryza sativa Japonica Group] dbj|BAD30671.1| bHLH transcription factor-like protein [Oryza sativa Japonica Group] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor, putative 1.011e-08
C-terminus
sp_v3.0_unigene199077 SustainPine v3.0 418
• AutoFact: APO protein 3 [Arabidopsis thaliana] ref|NP_001119475.1| APO protein 3 [Arabidopsis thaliana] sp|Q9FH50.1|APO3_ARATH RecName: Full=APO protein 3, mitochondrial; Flags: Precursor dbj|BAB08879.1| unnamed protein product [Arabidopsis thaliana] gb|AED97538.1| 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: APO protein 3, mitochondrial, putative 4.17e-09
C-terminus
sp_v3.0_unigene199185 SustainPine v3.0 475
• AutoFact: Putative basic helix-loop-helix protein BHLH21 n=1 Tax=Lotus japonicus RepID=C0JP28_LOTJA 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative anthocyanin transcriptional regulator 6.783e-22
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain