Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene129777 SustainPine v3.0 515
AutoFact: Unassigned protein
FL-Next: sp=Transcription factor bHLH25; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene130838 SustainPine v3.0 202
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inducer of CBF expression 1 5.633e-12
Internal
sp_v3.0_unigene130880 SustainPine v3.0 371
AutoFact: Helix-loop-helix DNA-binding n=2 Tax=Medicago truncatula RepID=Q2HVX8_MEDTR 2.0e-37
FL-Next: sp=Transcription factor LHW; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein At1g64625 5.379e-09
Internal
sp_v3.0_unigene131041 SustainPine v3.0 589
AutoFact: Unassigned protein 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene132623 SustainPine v3.0 337
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.23395e-41
Putative N-terminus
sp_v3.0_unigene138499 SustainPine v3.0 233
AutoFact: MYC transcription factor [Solanum tuberosum] 7.0e-15
FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Sma3: JAMYC 8.772e-06
Internal
sp_v3.0_unigene141204 SustainPine v3.0 147
AutoFact: Unassigned protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene141680 SustainPine v3.0 218
AutoFact: Unassigned protein 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene142182 SustainPine v3.0 218
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene152112 SustainPine v3.0 504
AutoFact: HLH domain containing protein 7.0e-11
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene157663 SustainPine v3.0 359
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.433e-30
Internal
sp_v3.0_unigene159803 SustainPine v3.0 250
AutoFact: Unassigned protein 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene161497 SustainPine v3.0 247
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 7.069e-08
Internal
sp_v3.0_unigene161548 SustainPine v3.0 265
AutoFact: Unassigned protein 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene161828 SustainPine v3.0 265
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 9.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene162319 SustainPine v3.0 180
AutoFact: Transcription factor bHLH87 n=2 Tax=Arabidopsis RepID=BH087_ARATH 2.0e-08
FL-Next: sp=Transcription factor bHLH87; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene163030 SustainPine v3.0 390
AutoFact: Unassigned protein 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene163249 SustainPine v3.0 364
AutoFact: basic helix-loop-helix (bHLH) family protein 9.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.049e-09
Internal
sp_v3.0_unigene164448 SustainPine v3.0 251
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164843 SustainPine v3.0 222
AutoFact: Inducer of CBF expression n=1 Tax=Camellia sinensis RepID=C7DZC4_CAMSI 9.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inducer of CBF expression 1 2.524e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain