Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein complex

Term: GO:0043234  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene60867 SustainPine v3.0 148
• AutoFact: putative proteasome regulatory subunit [Arabidopsis thaliana] emb|CAB79392.1| putative proteasome regulatory subunit [Arabidopsis thaliana] 8.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome subunit RPN7 1.214e-09
Internal
sp_v3.0_unigene61083 SustainPine v3.0 140
• AutoFact: 26S proteasome subunit 11 (Fragment) n=1 Tax=Platanus x acerifolia RepID=Q1M303_PLAAC 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61310 SustainPine v3.0 201
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 5.796e-14
Internal
sp_v3.0_unigene61449 SustainPine v3.0 239
• AutoFact: FtsZ-like protein [Nicotiana tabacum] 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 2.66e-10
Internal
sp_v3.0_unigene61620 SustainPine v3.0 271
• AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SW31_RICCO 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat protein 6.664e-14
Putative N-terminus
sp_v3.0_unigene61858 SustainPine v3.0 141
• AutoFact: 26S protease regulatory subunit 6a, putative n=2 Tax=Magnoliophyta RepID=B9RFB5_RICCO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TAT-binding protein homolog 1 3.58e-08
Internal
sp_v3.0_unigene61964 SustainPine v3.0 169
• AutoFact: FtsZ protein n=1 Tax=Gentiana lutea RepID=Q9SDW5_GENLU 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 2.903e-17
Internal
sp_v3.0_unigene62367 SustainPine v3.0 236
• AutoFact: CLL4B clavata1-like receptor S/T protein kinase protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SBP9_PHYPA 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 7.725e-14
Internal
sp_v3.0_unigene62819 SustainPine v3.0 238
• AutoFact: Similarity to 26S proteasome subunit 4 n=2 Tax=Arabidopsis thaliana RepID=Q9LIM2_ARATH 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bromodomain protein 3.642e-08
Internal
sp_v3.0_unigene63111 SustainPine v3.0 279
• AutoFact: 26S protease regulatory subunit 6B homolog n=13 Tax=Embryophyta RepID=PRS6B_ARATH 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S protease regulatory subunit 6B homolog 4.556e-09
Internal
sp_v3.0_unigene63113 SustainPine v3.0 186
• AutoFact: FtsZ-like protein [Nicotiana tabacum] 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: FtsZ1 1.575e-08
Internal
sp_v3.0_unigene63576 SustainPine v3.0 293
• AutoFact: proteasome subunit beta type-5-B [Arabidopsis thaliana] sp|Q9LIP2.1|PSB5B_ARATH RecName: Full=Proteasome subunit beta type-5-B; AltName: Full=20S proteasome beta subunit E-2; AltName: Full=Proteasome epsilon-2 chain; Flags: Precursor gb|AAL27514.1|AF43984 2.0e-40
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type 5 1.408e-08
Internal
sp_v3.0_unigene63743 SustainPine v3.0 181
• AutoFact: 26S proteasome AAA-ATPase subunit RPT1a [Arabidopsis thaliana] 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64121 SustainPine v3.0 234
• AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9RNY7_RICCO 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 7.071e-13
Internal
sp_v3.0_unigene64143 SustainPine v3.0 266
• AutoFact: Putative disease resistance protein n=2 Tax=Arabidopsis thaliana RepID=Q8L7L6_ARATH 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Somatic embryogenesis receptor-like kinase 1.304e-07
Internal
sp_v3.0_unigene64955 SustainPine v3.0 274
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 5.792e-27
Internal
sp_v3.0_unigene65480 SustainPine v3.0 364
• AutoFact: E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana] sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName: Full=Protein KEEP ON GOING; AltName: Full=RING finger protein KEG gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thali 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: 26S proteasome non-ATPase regulatory subunit 14 9.67e-09
Complete
sp_v3.0_unigene65548 SustainPine v3.0 313
• AutoFact: alpha tubulin-2A [Triticum aestivum] gb|ABD92931.1| alpha tubulin-2D [Triticum aestivum] gb|ABD92932.1| alpha tubulin-2B [Triticum aestivum] 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.675e-16
Internal
sp_v3.0_unigene65615 SustainPine v3.0 286
• AutoFact: AAA ATPase; 26S proteasome subunit P45 [Medicago truncatula] gb|ABN08912.1| AAA ATPase; 26S proteasome subunit P45 [Medicago truncatula] 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene65662 SustainPine v3.0 260
• AutoFact: 26S proteasome regulatory subunit 8 n=3 Tax=Spermatophyta RepID=Q9M613_PINTA 4.0e-31
• FL-Next: tr=26S proteasome regulatory subunit 8; Pinus taeda (Loblolly pine). 0.0
• Sma3: Putative 26S proteasome AAA-ATPase subunit RPT6a 6.427e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain