Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene70524 SustainPine v3.0 359
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
• Sma3: ICE-like protease p20 domain containing protein, expressed 2.26e-12
Internal
sp_v3.0_unigene70823 SustainPine v3.0 299
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.188e-13
N-terminus
sp_v3.0_unigene70916 SustainPine v3.0 309
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9RY77_PHYPA 7.0e-14
• FL-Next: sp=Pumilio homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative pumilio/Mpt5 family RNA-binding protein 1.79e-18
Internal
sp_v3.0_unigene72349 SustainPine v3.0 273
• AutoFact: Similar to gb|J04556 G11A protein from Oryza sativa and contains a PF|00069 Eukaryotic protein kinase domain [Arabidopsis thaliana] 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 4.792e-35
Internal
sp_v3.0_unigene73970 SustainPine v3.0 294
• AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001985AA9 9.00054e-42
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 4.276e-18
Internal
sp_v3.0_unigene74486 SustainPine v3.0 392
• AutoFact: FtsZ-like protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 1.413e-27
Internal
sp_v3.0_unigene74859 SustainPine v3.0 303
• AutoFact: tubulin alpha-2/alpha-4 chain [Arabidopsis thaliana] 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 5.15e-26
N-terminus
sp_v3.0_unigene74904 SustainPine v3.0 459
• AutoFact: TBB1_VOLCA Tubulin beta chain (ISS) (Fragment) n=27 Tax=Eukaryota RepID=Q01G07_OSTTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 1.125e-12
Internal
sp_v3.0_unigene75445 SustainPine v3.0 207
• AutoFact: Tubulin gamma chain n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7E6H2_SCLS1 5.0e-18
• FL-Next: sp=Tubulin gamma chain; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Gamma-tubulin 1.771e-19
Internal
sp_v3.0_unigene75575 SustainPine v3.0 253
• AutoFact: Tubulin alpha-1A chain n=6 Tax=Agaricales RepID=TBAA_SCHCO 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.214e-35
Internal
sp_v3.0_unigene75988 SustainPine v3.0 246
• AutoFact: Tubulin beta-1 chain (Fragment) n=1 Tax=Ascaris suum RepID=F1LHV5_ASCSU 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta-1 chain 6.343e-10
Internal
sp_v3.0_unigene76110 SustainPine v3.0 226
• AutoFact: 1-phosphatidylinositol-4-phosphate 5-kinase, putative n=1 Tax=Ricinus communis RepID=B9SKF6_RICCO 1.0e-33
• FL-Next: sp=Phosphatidylinositol 4-phosphate 5-kinase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ICE-like protease p20 domain containing protein, expressed 4.31e-12
Internal
sp_v3.0_unigene76692 SustainPine v3.0 279
• AutoFact: Alpha tubulin n=4 Tax=Agaricales RepID=A8NWX6_COPC7 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.945e-29
Internal
sp_v3.0_unigene77357 SustainPine v3.0 398
• AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box family protein 0.0
N-terminus
sp_v3.0_unigene77368 SustainPine v3.0 200
• AutoFact: Alpha-tubulin, putative n=2 Tax=Phytophthora infestans T30-4 RepID=D0N956_PHYIT 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene77927 SustainPine v3.0 278
• AutoFact: SBP domain containing protein 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LIGULELESS1 protein, putative 1.148e-10
Internal
sp_v3.0_unigene78140 SustainPine v3.0 331
• AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 1.0e-29
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 2.088e-13
Internal
sp_v3.0_unigene78270 SustainPine v3.0 294
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 1.00053e-42
• FL-Next: sp=Tubulin alpha-1 chain; Gossypium hirsutum (Upland cotton) (Gossypium mexicanum). 0.0
• Sma3: Tubulin alpha-2 chain 1.377e-09
Internal
sp_v3.0_unigene78674 SustainPine v3.0 263
• AutoFact: Beta-tubulin n=1 Tax=Reticulomyxa filosa RepID=Q26235_RETFI 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-4-tubulin 2.129e-07
Internal
sp_v3.0_unigene78793 SustainPine v3.0 165
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 3.724e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain