Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene25178 SustainPine v3.0 475
• AutoFact: Nitrate and chloride transporter n=1 Tax=Glycine max RepID=Q535K6_SOYBN 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 5.351e-17
N-terminus
sp_v3.0_unigene25542 SustainPine v3.0 539
• AutoFact: [D] COG0206 Cell division GTPase 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 1.369e-19
Putative N-terminus
sp_v3.0_unigene26751 SustainPine v3.0 1965
• AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box family protein 7.164e-32
Complete
sp_v3.0_unigene27548 SustainPine v3.0 648
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0T3_RICCO 8.0e-32
• FL-Next: tr=Dof domain zinc finger DNA-binding protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Dof zinc finger protein 2.847e-26
Putative N-terminus
sp_v3.0_unigene28679 SustainPine v3.0 643
• AutoFact: Nodulin family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWD3_ARALL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 4.13e-17
C-terminus
sp_v3.0_unigene28994 SustainPine v3.0 2834
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 1.8e-35
Complete
sp_v3.0_unigene29270 SustainPine v3.0 579
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 5.289e-10
C-terminus
sp_v3.0_unigene30527 SustainPine v3.0 1154
• AutoFact: reticulon-like protein B22 [Arabidopsis thaliana] sp|Q8GWH5.1|RTNLT_ARATH RecName: Full=Reticulon-like protein B22; Short=AtRTNLB22 dbj|BAC43428.1| unknown protein [Arabidopsis thaliana] gb|AAO63877.1| unknown protein [Arabidopsis thaliana] gb|AEE36170.1| 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene32266 SustainPine v3.0 1077
• AutoFact: RecName: Full=Tubulin alpha-1 chain gb|AAA79910.1| alpha-tubulin [Pisum sativum] 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Tubulin alpha-2 chain 1.35e-09
C-terminus
sp_v3.0_unigene34073 SustainPine v3.0 1881
• AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr2 scaffold_105, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene34100 SustainPine v3.0 1392
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.334e-26
N-terminus
sp_v3.0_unigene34178 SustainPine v3.0 1280
• AutoFact: FtsZ protein [Gentiana lutea] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 3.094e-27
C-terminus
sp_v3.0_unigene34195 SustainPine v3.0 1153
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.784e-17
N-terminus
sp_v3.0_unigene34339 SustainPine v3.0 920
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TBB1_VOLCA Tubulin beta chain (ISS) 3.313e-08
Internal
sp_v3.0_unigene34547 SustainPine v3.0 1965
• AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dof zinc finger protein 1.387e-28
Complete
sp_v3.0_unigene34942 SustainPine v3.0 1175
• AutoFact: Os01g0844800 protein n=3 Tax=Oryza sativa RepID=Q0JHT2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pumilio/Mpt5 family RNA-binding protein 2.005e-14
Complete
sp_v3.0_unigene35096 SustainPine v3.0 535
• AutoFact: Nodulin family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWD3_ARALL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 1.592e-16
Internal
sp_v3.0_unigene35326 SustainPine v3.0 687
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 6.971e-17
C-terminus
sp_v3.0_unigene35513 SustainPine v3.0 1076
• AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 4.899e-12
C-terminus
sp_v3.0_unigene35701 SustainPine v3.0 1740
• AutoFact: protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] gb|AAC16088.2| expressed protein [Arabidopsis thaliana] dbj|BAC42174.1| unknown protein [Arabidopsis thaliana] gb|AAO50636.1| unknown protein [Arabidopsis thaliana] gb|AEC1 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain