Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7052 SustainPine v3.0 2333
AutoFact: ATP-synt_B multi-domain protein 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 1.6e-34
Putative Complete
sp_v3.0_unigene7808 SustainPine v3.0 1999
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 3 0.0
Complete
sp_v3.0_unigene8594 SustainPine v3.0 1335
AutoFact: Viroid symptom modulation protein n=2 Tax=Solanum RepID=Q9M728_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 3.605e-28
C-terminus
sp_v3.0_unigene9046 SustainPine v3.0 2799
AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
FL-Next: sp=Homeobox-leucine zipper protein HDG2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Homeobox protein, putative 9.594e-18
Complete
sp_v3.0_unigene9111 SustainPine v3.0 2325
AutoFact: pfam02701, zf-Dof, Dof domain, zinc finger 5.0e-34
FL-Next: tr=Dof domain zinc finger DNA-binding protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: F-box family protein 1.722e-29
Complete
sp_v3.0_unigene9135 SustainPine v3.0 1312
AutoFact: reticulon-like protein B22 [Arabidopsis thaliana] sp|Q8GWH5.1|RTNLT_ARATH RecName: Full=Reticulon-like protein B22; Short=AtRTNLB22 dbj|BAC43428.1| unknown protein [Arabidopsis thaliana] gb|AAO63877.1| unknown protein [Arabidopsis thaliana] gb|AEE36170.1| 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9288 SustainPine v3.0 1973
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 8.102e-14
N-terminus
sp_v3.0_unigene9365 SustainPine v3.0 2363
AutoFact: MORN domain containing protein 4.0e-05
FL-Next: sp=Phosphatidylinositol 4-phosphate 5-kinase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ICE-like protease p20 domain containing protein, expressed 4.565e-12
Putative N-terminus
sp_v3.0_unigene9700 SustainPine v3.0 2603
AutoFact: F-box family protein n=2 Tax=Populus trichocarpa RepID=B9IES2_POPTR 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F-box family protein 1.555e-35
Complete
sp_v3.0_unigene9994 SustainPine v3.0 1398
AutoFact: F-box family protein n=2 Tax=Populus trichocarpa RepID=B9IES2_POPTR 2.0e-31
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Sma3: F-box family protein 2.011e-39
N-terminus
sp_v3.0_unigene10011 SustainPine v3.0 607
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RI95_RICCO 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.032e-39
C-terminus
sp_v3.0_unigene10586 SustainPine v3.0 1294
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nodulin family protein, putative, expressed 2.442e-16
C-terminus
sp_v3.0_unigene11002 SustainPine v3.0 3096
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 4.81907e-41
Complete
sp_v3.0_unigene11826 SustainPine v3.0 1453
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 7 emb|CAH67152.1| OSIGBa0122F23.9 [Oryza sativa Indica Group] 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Squamosa promoter-binding protein, putative 5.332e-23
Complete
sp_v3.0_unigene13003 SustainPine v3.0 580
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 3.409e-15
Internal
sp_v3.0_unigene13012 SustainPine v3.0 2414
AutoFact: Glycosyltransferase n=2 Tax=Solanum RepID=Q50HV0_SOLLC 0.0
FL-Next: sp=Probable beta-1,4-xylosyltransferase IRX14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glycosyltransferase 2.55e-30
Complete
sp_v3.0_unigene13576 SustainPine v3.0 380
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.47e-11
Internal
sp_v3.0_unigene13977 SustainPine v3.0 1397
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] dbj|BAE98810.1| putative C2H2-type zinc finger protein [Arabidopsis thaliana] gb|AEC05524.1| C2H2-like zinc finger protein [Arabidopsis thaliana] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 7.325e-14
Internal
sp_v3.0_unigene14460 SustainPine v3.0 1348
AutoFact: [D] COG0206 Cell division GTPase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastid division protein FtsZ 2.504e-27
C-terminus
sp_v3.0_unigene14831 SustainPine v3.0 504
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZZ7_RICCO 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Squamosa promoter-binding protein, putative 2.636e-23
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain