Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene110554 SustainPine v3.0 481
AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IA87_POPTR 0.0
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1 0.0
Sma3: Trithorax-like protein, histone-lysine N-methyltransferase 2.541e-12
Internal
sp_v3.0_unigene112810 SustainPine v3.0 331
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 4.0e-27
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Sma3: DNA-directed RNA polymerase 1.476e-08
Internal
sp_v3.0_unigene113453 SustainPine v3.0 453
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene114277 SustainPine v3.0 382
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 1.99993e-41
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 1.086e-10
Putative N-terminus
sp_v3.0_unigene114847 SustainPine v3.0 380
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 2.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Pinus taiwanensis. Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 1.032e-34
Internal
sp_v3.0_unigene114970 SustainPine v3.0 626
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene115291 SustainPine v3.0 239
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 5.0e-31
FL-Next: sp=DNA-directed RNA polymerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: DNA-directed RNA polymerase 2.481e-22
Internal
sp_v3.0_unigene115580 SustainPine v3.0 350
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9T428_RICCO 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 1.888e-26
Internal
sp_v3.0_unigene116171 SustainPine v3.0 316
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 2.0e-29
FL-Next: sp=DNA-directed RNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: DNA-directed RNA polymerase 4.546e-08
Internal
sp_v3.0_unigene118670 SustainPine v3.0 335
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 3.0e-24
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 4.865e-17
Internal
sp_v3.0_unigene119775 SustainPine v3.0 383
AutoFact: DNA-directed RNA polymerase n=4 Tax=Agaricomycetidae RepID=D8PLU0_SCHCM 1.0e-25
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene120057 SustainPine v3.0 439
AutoFact: DNA-directed RNA polymerase subunit beta' n=71 Tax=Propionibacterium RepID=RPOC_PROAC 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Halocarpus kirkii. Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase subunit beta'' 0.0
Internal
sp_v3.0_unigene124851 SustainPine v3.0 325
AutoFact: concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] sp|Q9M345.1|LRK42_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IV.2; Short=Arabidopsis thaliana lectin-receptor kinase a4; Short=AthlecRK-a4; Short=LecRK-IV.2; Al 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 7.906e-27
Internal
sp_v3.0_unigene124869 SustainPine v3.0 194
AutoFact: DNA-directed RNA polymerase 1B, mitochondrial n=3 Tax=Nicotiana RepID=RPO1B_TOBAC 7.0e-21
FL-Next: sp=DNA-directed RNA polymerase 1B, mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Sma3: DNA-directed RNA polymerase 4.408e-19
Internal
sp_v3.0_unigene126750 SustainPine v3.0 892
AutoFact: DUF659 domain containing protein 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene126955 SustainPine v3.0 518
AutoFact: potential RNA Polymerase I and III shared subunit Rpc19 [Candida albicans SC5314] ref|XP_710695.1| potential RNA Polymerase I and III shared subunit Rpc19 [Candida albicans SC5314] gb|EAK91447.1| potential RNA Polymerase I and III shared subunit Rpc19 [Ca 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene127155 SustainPine v3.0 961
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 2.8026e-45
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127668 SustainPine v3.0 522
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene128420 SustainPine v3.0 384
AutoFact: PREDICTED: similar to cAMP response element-binding protein 5 n=1 Tax=Hydra magnipapillata RepID=UPI0001925AA1 2.0e-07
Sma3: DNA-directed RNA polymerase 5.695e-18
coding
sp_v3.0_unigene128427 SustainPine v3.0 577
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 1.453e-07
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain