Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene69224 SustainPine v3.0 277
• AutoFact: DNA-directed RNA polymerase (Fragment) n=5 Tax=Spermatophyta RepID=A2RQN0_9SPER 2.0e-38
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: DNA-directed RNA polymerase 1.747e-40
Internal
sp_v3.0_unigene69322 SustainPine v3.0 333
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 1.0e-26
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Sma3: DNA-directed RNA polymerase 7.418e-06
Internal
sp_v3.0_unigene69536 SustainPine v3.0 184
• AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 3.0e-20
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 3.761e-22
Internal
sp_v3.0_unigene73982 SustainPine v3.0 496
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Marasmius alliaceus RepID=Q5I2D9_9AGAR 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Nageia nagi. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene74885 SustainPine v3.0 342
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 8.0e-17
• FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: DNA-directed RNA polymerase 9.633e-11
N-terminus
sp_v3.0_unigene74892 SustainPine v3.0 311
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 8.0e-30
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Internal
sp_v3.0_unigene75117 SustainPine v3.0 293
• AutoFact: RNA polymerase II subunit RPB2 (Fragment) n=20 Tax=Polyporales RepID=Q873T6_9APHY 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 6.215e-30
Internal
sp_v3.0_unigene75439 SustainPine v3.0 176
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Berberidopsis corallina RepID=Q1L5Z7_9MAGN 2.0e-17
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 1.545e-24
Internal
sp_v3.0_unigene75452 SustainPine v3.0 97
• AutoFact: DNA-directed RNA polymerase subunit n=7 Tax=Embryophyta RepID=Q2QNM4_ORYSJ 2.0e-07
• FL-Next: tr=Putative uncharacterized protein Sb05g026420; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 3.448e-08
Internal
sp_v3.0_unigene76907 SustainPine v3.0 285
• AutoFact: RNA polymerase II second largest subunit (Fragment) n=1 Tax=Teucrium fruticans RepID=Q6Q254_9LAMI 3.0e-39
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 3.49501e-40
Internal
sp_v3.0_unigene78149 SustainPine v3.0 193
• AutoFact: DNA-directed RNA polymerase n=2 Tax=Selaginella moellendorffii RepID=D8T979_SELML 3.0e-22
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: DNA-directed RNA polymerase 1.324e-14
Internal
sp_v3.0_unigene78676 SustainPine v3.0 248
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SU72_RICCO 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 1.026e-11
N-terminus
sp_v3.0_unigene78942 SustainPine v3.0 445
• AutoFact: DNA-directed RNA polymerase I, II, and III subunit Rpb10 [Schizosaccharomyces pombe 972h-] sp|O13877.2|RPAB5_SCHPO RecName: Full=DNA-directed RNA polymerases I, II, and III subunit RPABC5; Short=RNA polymerases I, II, and III subunit ABC5; AltName: Full=A 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RPB10 4.959e-09
Complete
sp_v3.0_unigene79110 SustainPine v3.0 433
• AutoFact: DNA-directed RNA polymerase subunit n=3 Tax=Andropogoneae RepID=C5YC89_SORBI 2.0e-16
• FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
• Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 4.49e-08
Putative N-terminus
sp_v3.0_unigene80757 SustainPine v3.0 186
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 3.0e-16
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Sma3: DNA-directed RNA polymerase 4.457e-06
Internal
sp_v3.0_unigene80919 SustainPine v3.0 157
• AutoFact: putative RNA polymerase III [Oryza sativa Japonica Group] 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: DNA-directed RNA polymerase 6.195e-07
Internal
sp_v3.0_unigene80927 SustainPine v3.0 347
• AutoFact: RNA polymerase III subunit RPC82 family protein [Arabidopsis thaliana] gb|AAM20485.1| RNA polymerase III subunit-like protein [Arabidopsis thaliana] gb|AAQ56824.1| At3g49000 [Arabidopsis thaliana] gb|AEE78481.1| RNA polymerase III subunit RPC82 family pro 8.0e-15
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene80950 SustainPine v3.0 239
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 4.358e-27
Internal
sp_v3.0_unigene85223 SustainPine v3.0 352
• AutoFact: Caudal_act multi-domain protein 5.0e-06
• Sma3: DNA-directed RNA polymerase 6.888e-19
coding
sp_v3.0_unigene85291 SustainPine v3.0 323
• AutoFact: Herpes_BLLF1 multi-domain protein 6.0e-09
• Sma3: DNA-directed RNA polymerase 6.813e-20
coding

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain