Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Protein of unknown function DUF868, plant

Term: IPR008586  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene145385 SustainPine v3.0 728
• AutoFact: Protein phosphatase 2C n=1 Tax=Medicago sativa RepID=O24078_MEDSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 9.112e-10
C-terminus
sp_v3.0_unigene149457 SustainPine v3.0 365
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene153799 SustainPine v3.0 356
• AutoFact: Ribosomal protein L24-like protein n=1 Tax=Polysphondylium pallidum RepID=D3BSM2_POLPA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene155023 SustainPine v3.0 349
• AutoFact: Ribosomal protein L24-like protein n=1 Tax=Polysphondylium pallidum RepID=D3BSM2_POLPA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene162206 SustainPine v3.0 336
• AutoFact: Protein phosphatase 2C n=1 Tax=Medicago sativa RepID=O24078_MEDSA 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2C 9.791e-24
Internal
sp_v3.0_unigene164018 SustainPine v3.0 280
• AutoFact: [J] COG2075 Ribosomal protein L24E 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164207 SustainPine v3.0 250
• AutoFact: DUF868 domain containing protein 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166832 SustainPine v3.0 330
• AutoFact: Protein phosphatase 2C n=1 Tax=Nicotiana benthamiana RepID=Q3V5Z0_NICBE 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 4.646e-10
Internal
sp_v3.0_unigene183005 SustainPine v3.0 836
putative_coding
sp_v3.0_unigene186089 SustainPine v3.0 681
• AutoFact: Probable ribosome biogenesis protein RLP24 n=20 Tax=Amniota RepID=RLP24_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene190067 SustainPine v3.0 623
• AutoFact: ribosomal L24 domain containing 1 [Xenopus laevis] gb|AAH42273.1| MGC53444 protein [Xenopus laevis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene196840 SustainPine v3.0 266
• AutoFact: putative protein phosphatase 2C (PP2C) [Arabidopsis thaliana] gb|AAO50609.1| putative protein phosphatase 2C (PP2C) [Arabidopsis thaliana] 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 7.545e-10
Internal
sp_v3.0_unigene206882 SustainPine v3.0 484
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene207352 SustainPine v3.0 288
• AutoFact: 60S ribosomal protein L30-like protein n=6 Tax=Oryza sativa RepID=Q5QMX1_ORYSJ 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene209353 SustainPine v3.0 294
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene209417 SustainPine v3.0 471
• AutoFact: DUF868 domain containing protein 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene209578 SustainPine v3.0 473
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene210128 SustainPine v3.0 286
• AutoFact: Protein phosphatase 2C n=1 Tax=Medicago sativa RepID=O24078_MEDSA 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 1.247e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain