Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene110161 SustainPine v3.0 351
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-39
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene110276 SustainPine v3.0 202
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 1.0e-19
FL-Next: sp=Glutamate receptor 3.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.345e-17
Internal
sp_v3.0_unigene110467 SustainPine v3.0 647
AutoFact: DUF659 domain containing protein 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene110651 SustainPine v3.0 403
AutoFact: DUF659 domain containing protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene111038 SustainPine v3.0 252
AutoFact: Dimer_Tnp_hAT domain containing protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 3.308e-08
Internal
sp_v3.0_unigene111090 SustainPine v3.0 550
AutoFact: Histone deacetylase hda2, putative n=1 Tax=Ricinus communis RepID=B9SNC7_RICCO 9.94922e-44
FL-Next: tr=Histone deacetylase hda2, putative; Ricinus communis (Castor bean). 0.0
Putative Complete
sp_v3.0_unigene111315 SustainPine v3.0 322
AutoFact: Pectinesterase-3, putative n=1 Tax=Ricinus communis RepID=B9RH55_RICCO 2.0e-37
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene111469 SustainPine v3.0 241
AutoFact: Aprataxin, putative n=1 Tax=Ricinus communis RepID=B9SWY0_RICCO 3.0e-15
FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene111530 SustainPine v3.0 491
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 5.009e-08
Internal
sp_v3.0_unigene111672 SustainPine v3.0 146
AutoFact: C2-H2 zinc finger protein [Arabidopsis thaliana] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transparent testa 1 2.532e-08
Internal
sp_v3.0_unigene111954 SustainPine v3.0 577
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.58e-22
Internal
sp_v3.0_unigene112155 SustainPine v3.0 343
AutoFact: Unassigned protein
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene112282 SustainPine v3.0 317
AutoFact: ATP-dependent RNA helicase, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 8.99998e-41
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.012e-24
Internal
sp_v3.0_unigene112295 SustainPine v3.0 245
AutoFact: ATP binding/protein serine/threonine kinase n=4 Tax=Magnoliophyta RepID=C6FF68_SOYBN 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative leucine-rich repeat receptor-like kinase 7.39e-24
Internal
sp_v3.0_unigene112647 SustainPine v3.0 244
AutoFact: Kinase-like protein (Fragment) n=1 Tax=Corylus avellana RepID=C7A7W5_CORAV 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative S-receptor kinase 2.164e-13
Internal
sp_v3.0_unigene112707 SustainPine v3.0 215
AutoFact: Unassigned protein
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene112777 SustainPine v3.0 399
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger protein ZAT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene113453 SustainPine v3.0 453
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene113636 SustainPine v3.0 538
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT dimerisation domain-containing protein-like 5.092e-07
Putative Complete
sp_v3.0_unigene113880 SustainPine v3.0 465
AutoFact: DUF659 domain containing protein 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 9.9e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain