Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene106734 SustainPine v3.0 238
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 2.0e-09
FL-Next: sp=Glutamate receptor 3.7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate receptor 3 plant, putative 6.391e-17
Internal
sp_v3.0_unigene107041 SustainPine v3.0 597
AutoFact: abscisic acid receptor PYL7 [Arabidopsis thaliana] sp|Q1ECF1.1|PYL7_ARATH RecName: Full=Abscisic acid receptor PYL7; AltName: Full=ABI1-binding protein 7; AltName: Full=PYR1-like protein 7; AltName: Full=Regulatory components of ABA receptor 2 gb|ABF83673 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 3.277e-12
N-terminus
sp_v3.0_unigene107132 SustainPine v3.0 471
AutoFact: DUF659 domain containing protein 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene107736 SustainPine v3.0 246
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 2.099e-06
Internal
sp_v3.0_unigene107807 SustainPine v3.0 388
AutoFact: myosin class 11-2 [Adiantum capillus-veneris] 3.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Myosin XI, putative 2.641e-23
Internal
sp_v3.0_unigene107887 SustainPine v3.0 409
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene107908 SustainPine v3.0 588
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HHX6_POPTR 4.00001e-40
FL-Next: sp=Endoribonuclease Dicer homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dicer-like protein 3.417e-20
N-terminus
sp_v3.0_unigene108081 SustainPine v3.0 344
AutoFact: putative ionotropic glutamate receptor ortholog GLR6 [Oryza sativa Japonica Group] dbj|BAD45881.1| putative ionotropic glutamate receptor ortholog GLR6 [Oryza sativa Japonica Group] 9.0e-32
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 4.436e-19
Internal
sp_v3.0_unigene108514 SustainPine v3.0 427
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.923e-18
Internal
sp_v3.0_unigene108609 SustainPine v3.0 413
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene108670 SustainPine v3.0 410
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene108708 SustainPine v3.0 775
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAC01781.1| putative protein [Arabidopsis thaliana] gb|AAL15297.1| AT5g15820/F14F8_200 [Arabidopsis thaliana] gb|AAM47324.1| AT5g15820/F14F8_200 [Arabidopsis thaliana] gb|AED92211.1| RING/U-b 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene108715 SustainPine v3.0 868
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 3.0e-33
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Glutamate receptor 3 plant, putative 1.75e-17
N-terminus
sp_v3.0_unigene108732 SustainPine v3.0 322
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 2.0e-31
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.386e-16
Internal
sp_v3.0_unigene109615 SustainPine v3.0 592
AutoFact: high-affinity K+ transporter [Capsicum annuum] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative potassium transporter 1.862e-32
N-terminus
sp_v3.0_unigene109751 SustainPine v3.0 647
AutoFact: Pectinesterase n=1 Tax=Populus trichocarpa RepID=B9IHB0_POPTR 2.0e-34
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 8.401e-11
Putative C-terminus
sp_v3.0_unigene109895 SustainPine v3.0 391
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CRZ8_VITVI 1.0e-32
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 5.995e-19
Internal
sp_v3.0_unigene109933 SustainPine v3.0 449
AutoFact: dicer-like protein 4 [Arabidopsis thaliana] sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4 gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana] gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana] 1.0e-23
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Dicer-like protein 3.366e-07
Internal
sp_v3.0_unigene109949 SustainPine v3.0 379
AutoFact: Early flowering 6 n=4 Tax=Arabidopsis RepID=Q6BDA0_ARATH 4.0e-16
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Jumonji domain protein 3.448e-07
N-terminus
sp_v3.0_unigene110041 SustainPine v3.0 473
AutoFact: helicase , IBR and zinc finger protein domain-containing protein [Arabidopsis thaliana] gb|AED91533.1| helicase , IBR and zinc finger protein domain-containing protein [Arabidopsis thaliana] 7.0e-38
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.852e-21
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain