Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene100314 SustainPine v3.0 698
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene100438 SustainPine v3.0 590
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene100759 SustainPine v3.0 225
• AutoFact: C2H2 type zinc finger family protein (Fragment) n=4 Tax=Pseudotsuga RepID=C6F7G3_PSEMZ 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 2.315e-21
Internal
sp_v3.0_unigene100961 SustainPine v3.0 337
• AutoFact: E3 ubiquitin-protein ligase UBR4 [Arabidopsis thaliana] sp|Q9SRU2.2|BIG_ARATH RecName: Full=Auxin transport protein BIG; AltName: Full=Protein ATTENUATED SHADE AVOIDANCE 1; AltName: Full=Protein CORYMBOSA1; AltName: Full=Protein DARK OVER-EXPRESSION OF CA 9.99995e-41
• FL-Next: sp=Auxin transport protein BIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene101234 SustainPine v3.0 783
• AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9GU66_POPTR 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 2.108e-19
Putative Complete
sp_v3.0_unigene101782 SustainPine v3.0 288
• AutoFact: Unassigned protein 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene101920 SustainPine v3.0 316
• AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9P2L6_PICSI 9.0e-37
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene102098 SustainPine v3.0 615
• AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent RNA helicase, putative 3.728e-16
Putative N-terminus
sp_v3.0_unigene102128 SustainPine v3.0 925
• AutoFact: V-type H+-transporting ATPase subunit I [Arabidopsis thaliana] gb|AAM14030.1| putative vacuolar proton-ATPase subunit [Arabidopsis thaliana] gb|AEC08134.1| V-type H+-transporting ATPase subunit I [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Vacuolar proton atpase, putative 1.318e-12
N-terminus
sp_v3.0_unigene102183 SustainPine v3.0 617
• AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] dbj|BAB11049.1| unnamed protein product [Arabidopsis thaliana] gb|AAK62647.1| AT5g52010/MSG15_9 [Arabidopsis thaliana] gb|AAM91075.1| AT5g52010/MSG15_9 [Arabidopsis thaliana] gb|AED96158.1| C2H2-like zi 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 2.039e-08
Internal
sp_v3.0_unigene102228 SustainPine v3.0 781
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative uncharacterized protein At2g36810 3.705e-10
Internal
sp_v3.0_unigene102506 SustainPine v3.0 678
• AutoFact: Dimer_Tnp_hAT domain containing protein 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 1.443e-07
Putative C-terminus
sp_v3.0_unigene102530 SustainPine v3.0 701
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 1 protein, putative 5.448e-19
C-terminus
sp_v3.0_unigene102585 SustainPine v3.0 597
• AutoFact: RHC1A n=2 Tax=Zea mays RepID=B6T839_MAIZE 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 1.633e-12
C-terminus
sp_v3.0_unigene102606 SustainPine v3.0 449
• AutoFact: Unassigned protein 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102688 SustainPine v3.0 683
• AutoFact: unconventional myosin [Helianthus annuus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Myosin XI, putative 4.075e-23
Internal
sp_v3.0_unigene102860 SustainPine v3.0 715
• AutoFact: zinc finger protein MAGPIE [Arabidopsis thaliana] sp|Q9ZWA6.1|MGP_ARATH RecName: Full=Zinc finger protein MAGPIE gb|AAD10684.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAP12858.1| At1g03840 [Arabidopsis thaliana] dbj|BAE99815.1| putative DN 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 3.788e-32
Putative N-terminus
sp_v3.0_unigene102872 SustainPine v3.0 648
• AutoFact: C2H2-type zinc finger protein [Arabidopsis thaliana] emb|CAB83312.1| putative protein [Arabidopsis thaliana] dbj|BAD44357.1| unknown protein [Arabidopsis thaliana] dbj|BAH30572.1| hypothetical protein [Arabidopsis thaliana] gb|AED90616.1| C2H2-type zinc f 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene102924 SustainPine v3.0 483
• AutoFact: Unassigned protein
• FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene102947 SustainPine v3.0 545
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SD76_RICCO 0.0
• FL-Next: sp=B3 domain-containing transcription repressor VAL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcription factor, putative 3.079e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain