Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene97269 SustainPine v3.0 1305
AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.094e-34
Internal
sp_v3.0_unigene97342 SustainPine v3.0 344
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene97629 SustainPine v3.0 399
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] gb|AAL91183.1| unknown protein [Arabidopsis thaliana] gb|AAN15705.1| unknown protein [Arabidopsis thaliana] gb|AEE85082.1| C2H2-like zinc finger protein [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene97697 SustainPine v3.0 144
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 2.244e-25
Internal
sp_v3.0_unigene97712 SustainPine v3.0 798
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 0.0
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histone acetyltransferase 7.131e-14
Internal
sp_v3.0_unigene98188 SustainPine v3.0 382
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene98370 SustainPine v3.0 375
AutoFact: DUF659 domain containing protein 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene98491 SustainPine v3.0 528
AutoFact: Unassigned protein
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene98601 SustainPine v3.0 531
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Transposase-like protein 3.426e-06
Internal
sp_v3.0_unigene98801 SustainPine v3.0 316
AutoFact: Glutamate receptor 3.2 n=2 Tax=Arabidopsis RepID=GLR32_ARATH 1.0e-23
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 4.955e-17
Internal
sp_v3.0_unigene99021 SustainPine v3.0 354
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 1.0e-21
FL-Next: sp=Glutamate receptor 3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene99132 SustainPine v3.0 447
AutoFact: Potassium transporter n=5 Tax=PACCAD clade RepID=Q1T6Z3_PHRAU 0.0
FL-Next: sp=Potassium transporter 23; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Potassium transporter 3.498e-17
Internal
sp_v3.0_unigene99222 SustainPine v3.0 573
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative zinc-finger protein 8.299e-07
N-terminus
sp_v3.0_unigene99231 SustainPine v3.0 274
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene99334 SustainPine v3.0 410
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative zinc-finger protein 4.92e-07
Internal
sp_v3.0_unigene99558 SustainPine v3.0 691
AutoFact: Unassigned protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene99643 SustainPine v3.0 569
AutoFact: DUF1644 domain containing protein 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene99720 SustainPine v3.0 487
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gb|ABF59157.1| hypothetical protein At1g51770 [Arabidopsis thaliana] gb|AEE32713.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene100252 SustainPine v3.0 267
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene100281 SustainPine v3.0 308
AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain