Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2039 SustainPine v3.0 2107
AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj| 2.0e-34
FL-Next: sp=E3 ubiquitin-protein ligase PRT1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene2140 SustainPine v3.0 2099
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Complete
sp_v3.0_unigene2179 SustainPine v3.0 860
AutoFact: Probable histone acetyltransferase HAC-like 1 n=4 Tax=Poaceae RepID=HACL1_ORYSJ 0.0
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histone acetyltransferase 1.638e-13
Internal
sp_v3.0_unigene2265 SustainPine v3.0 1025
AutoFact: Histone deacetylase 2a, putative n=1 Tax=Ricinus communis RepID=B9SN80_RICCO 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene2339 SustainPine v3.0 1127
AutoFact: [R] COG5048 FOG: Zn-finger 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor IIIA 1.228e-12
Putative C-terminus
sp_v3.0_unigene2397 SustainPine v3.0 811
AutoFact: Zinc finger family protein n=2 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LRU5_ARALL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DHHC-type Zn-finger proteins (ISS) 1.519e-07
N-terminus
sp_v3.0_unigene2424 SustainPine v3.0 2089
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAB71884.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAO29956.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAQ56798.1| At3g62240 [Arabidopsis thaliana] gb|AEE80326. 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative zinc-finger protein 4.99e-07
N-terminus
sp_v3.0_unigene2425 SustainPine v3.0 2906
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative zinc-finger protein 5.796e-07
Complete
sp_v3.0_unigene2716 SustainPine v3.0 4576
AutoFact: Cysteine-type endopeptidase, putative n=1 Tax=Ricinus communis RepID=B9RNQ1_RICCO 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 5.258e-13
Complete
sp_v3.0_unigene2719 SustainPine v3.0 824
AutoFact: PHD finger-containing protein n=3 Tax=Arabidopsis RepID=Q0WKW1_ARATH 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene2738 SustainPine v3.0 1220
AutoFact: zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] ref|NP_850780.1| zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] sp|Q9FNG6.1|C3H51_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 51; Short=AtC3H51 d 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RING finger protein 113A, putative 8.985e-09
Putative Complete
sp_v3.0_unigene2815 SustainPine v3.0 6319
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Complete
sp_v3.0_unigene2900 SustainPine v3.0 1425
AutoFact: zinc finger protein-like protein [Arabidopsis thaliana] gb|AAF76471.1|AC020622_5 Contains similarity to an unnamed protein from Homo sapiens gb|AK001277 and contains an Ank repeat PF|00023 domain [Arabidopsis thaliana] dbj|BAC43309.1| unknown protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene3136 SustainPine v3.0 3007
AutoFact: Med15 domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transparent testa 1 2.751e-08
Complete
sp_v3.0_unigene3177 SustainPine v3.0 1741
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.555e-16
Putative Complete
sp_v3.0_unigene3246 SustainPine v3.0 1063
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SZ00_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 2.232e-17
C-terminus
sp_v3.0_unigene3253 SustainPine v3.0 2798
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 1.074e-06
Complete
sp_v3.0_unigene3293 SustainPine v3.0 3405
AutoFact: DNAJ heat shock N-terminal domain-containing protein n=2 Tax=Arabidopsis RepID=Q9C911_ARATH 0.0
FL-Next: tr=Heat shock-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Complete
sp_v3.0_unigene3357 SustainPine v3.0 780
AutoFact: Receptor-like protein kinase 4 n=2 Tax=Arabidopsis RepID=F4JH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-receptor kinase, putative 4.235e-16
Internal
sp_v3.0_unigene3406 SustainPine v3.0 2470
AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AEE79818.1| protein kinase family protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Serine/threonine-protein kinase At3g07070; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Receptor serine-threonine protein kinase, putative 1.441e-24
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain