Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene34340 SustainPine v3.0 623
• AutoFact: DNA topoisomerase 6 subunit A [Arabidopsis thaliana] ref|XP_002870991.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp. lyrata] sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA topoisomerase 6 subunit A; Short=AtTOP6A; AltName: Full=Meiotic re 0.0
• FL-Next: sp=DNA topoisomerase 6 subunit A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Topoisomerase 4.425e-08
C-terminus
sp_v3.0_unigene34512 SustainPine v3.0 489
• AutoFact: Plastid CUL1 n=1 Tax=Hevea brasiliensis RepID=D8V3L8_HEVBR 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene34544 SustainPine v3.0 1747
• AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34621 SustainPine v3.0 319
• AutoFact: Sucrose phosphate synthase n=1 Tax=Selaginella moellendorffii RepID=D8QZA5_SELML 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sucrose-phosphate synthase 4.281e-31
Internal
sp_v3.0_unigene34779 SustainPine v3.0 464
• AutoFact: Heat stress transcription factor B-4c n=3 Tax=Oryza sativa RepID=HFB4C_ORYSJ 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock transcription factor 6.056e-20
Internal
sp_v3.0_unigene34843 SustainPine v3.0 1126
• AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
• FL-Next: tr=Caffeic acid O-3-methyltransferase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Caffeic acid 3-O-methyltransferase 0.0
Putative Complete
sp_v3.0_unigene34959 SustainPine v3.0 990
• AutoFact: putative transcription initiation factor IIF beta subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor IIF subunit beta, putative 4.296e-09
N-terminus
sp_v3.0_unigene34975 SustainPine v3.0 758
• AutoFact: RNA polymerase sigma factor n=2 Tax=Cyanothece RepID=B7K1V2_CYAP8 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sigma factor 2 2.424e-08
Putative C-terminus
sp_v3.0_unigene35234 SustainPine v3.0 1281
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene35463 SustainPine v3.0 589
• AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 0.0
• FL-Next: tr=Caffeic acid ortho-methyltransferase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Alkaloid o-methyltransferase related 2.9e-09
C-terminus
sp_v3.0_unigene35910 SustainPine v3.0 598
• AutoFact: LA RNA-binding protein n=5 Tax=Arabidopsis RepID=F4K704_ARATH 3.9937e-43
• FL-Next: tr=AT5g21160/T10F18_190; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene35943 SustainPine v3.0 768
• AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_974613.1| uncharacterized protein [Arabidopsis thaliana] emb|CAB36745.1| putative protein [Arabidopsis thaliana] emb|CAB79412.1| putative protein [Arabidopsis thaliana] gb|AAM62860.1| unknown [Arabidop 9.0e-22
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
N-terminus
sp_v3.0_unigene36445 SustainPine v3.0 980
• AutoFact: Heat stress transcription factor B-4b n=3 Tax=Oryza sativa RepID=HFB4B_ORYSJ 4.99983e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock transcription factor 9.994e-10
Internal
sp_v3.0_unigene36514 SustainPine v3.0 669
• AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_974613.1| uncharacterized protein [Arabidopsis thaliana] emb|CAB36745.1| putative protein [Arabidopsis thaliana] emb|CAB79412.1| putative protein [Arabidopsis thaliana] gb|AAM62860.1| unknown [Arabidop 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
N-terminus
sp_v3.0_unigene36647 SustainPine v3.0 1175
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene36693 SustainPine v3.0 1205
• AutoFact: putative histone H1 [Cryptomeria japonica] 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 1.688e-08
Putative Complete
sp_v3.0_unigene37177 SustainPine v3.0 274
• AutoFact: cullin 1A [Nicotiana tabacum] 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin 6.254e-08
Internal
sp_v3.0_unigene37214 SustainPine v3.0 2343
• AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor Dp-1 3.295e-08
Complete
sp_v3.0_unigene37581 SustainPine v3.0 1202
• AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor Dp-1 3.155e-08
N-terminus
sp_v3.0_unigene37592 SustainPine v3.0 934
• AutoFact: transcription factor (E2F) [Chenopodium rubrum] 8.0e-34
• FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Transcription factor E2F 6.907e-19
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain