Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translational initiation

Term: GO:0006413  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene144717 SustainPine v3.0 286
AutoFact: eukaryotic translation initiation factor 4E-1 [Zea mays] sp|O81481.1|IF4E1_MAIZE RecName: Full=Eukaryotic translation initiation factor 4E-1; Short=eIF-4E-1; Short=eIF4E-1; AltName: Full=eIF-4F 25 kDa subunit; AltName: Full=eIF-4F p26 subunit; AltName: Fu 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 4E-2 5.163e-18
Internal
sp_v3.0_unigene144723 SustainPine v3.0 525
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 3.0e-31
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Translation initiation factor 5A 3.478e-16
Complete
sp_v3.0_unigene144736 SustainPine v3.0 210
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A-1 1.178e-14
Putative C-terminus
sp_v3.0_unigene144935 SustainPine v3.0 271
AutoFact: Protein translation factor SUI1 homolog n=22 Tax=Spermatophyta RepID=SUI1_ORYSJ 2.0e-08
FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
Sma3: Protein translation factor SUI1 homolog 1.445e-15
Putative N-terminus
sp_v3.0_unigene148577 SustainPine v3.0 399
AutoFact: Eukaryotic translation initiation factor 5 n=4 Tax=Andropogoneae RepID=IF5_MAIZE 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5 9.341e-09
Putative N-terminus
sp_v3.0_unigene150175 SustainPine v3.0 222
AutoFact: Eukaryotic translation initiation factor eIF-5A n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8N3H7_ASPFN 5.0e-22
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A-4 1.069e-08
Internal
sp_v3.0_unigene150775 SustainPine v3.0 428
AutoFact: Translation initiation factor IF-2 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PHH2_CHIPD 3.00018e-42
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
Sma3: Translation initiation factor IF-2 1.986e-34
Internal
sp_v3.0_unigene150878 SustainPine v3.0 453
AutoFact: Eukaryotic initiation factor 2 beta subunit n=1 Tax=Ectocarpus siliculosus RepID=D7G233_ECTSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-2-beta 2.427e-13
C-terminus
sp_v3.0_unigene151034 SustainPine v3.0 290
AutoFact: Eukaryotic translation initiation factor 1A, Y-chromosomal n=1 Tax=Ascaris suum RepID=F1KZC0_ASCSU 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 1A 2.907e-19
Putative C-terminus
sp_v3.0_unigene151505 SustainPine v3.0 499
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 4.0e-35
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 2.288e-20
Putative Complete
sp_v3.0_unigene151642 SustainPine v3.0 369
AutoFact: Probable translation initiation factor SUI1 n=2 Tax=Ustilaginaceae RepID=E7A0P1_9BASI 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein translation factor SUI1 homolog 4.582e-15
Putative Complete
sp_v3.0_unigene152234 SustainPine v3.0 362
AutoFact: putative Glycine-rich protein 2 [Oryza sativa Japonica Group] dbj|BAD07599.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group] gb|EAZ21537.1| hypothetical protein OsJ_05164 [Oryza sativa Japonica Group] gb|ACD13288.1| cold shock domain protei 1.0e-17
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Cold-shock protein with RNA binding domain 4.714e-08
Putative N-terminus
sp_v3.0_unigene152549 SustainPine v3.0 284
AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Postia placenta Mad-698-R RepID=B8PCC0_POSPM 3.0e-39
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.006e-28
Putative N-terminus
sp_v3.0_unigene152596 SustainPine v3.0 475
AutoFact: Translation initiation factor IF-3 n=2 Tax=Sphingobium RepID=D4YZ43_SPHJU 0.0
FL-Next: sp=Translation initiation factor IF-3, chloroplastic; Porphyra yezoensis. Plastid; Chloroplast. 0.0
Sma3: Translation initiation factor IF-3 5.518e-13
C-terminus
sp_v3.0_unigene152622 SustainPine v3.0 431
AutoFact: Polyadenylate-binding protein 1-B n=2 Tax=Phytophthora infestans T30-4 RepID=D0MV08_PHYIT 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly(A)-binding protein 1.972e-13
Putative C-terminus
sp_v3.0_unigene153063 SustainPine v3.0 534
AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.377e-10
Internal
sp_v3.0_unigene153066 SustainPine v3.0 390
AutoFact: Translation initiation factor IF-2 n=1 Tax=Flavobacterium johnsoniae UW101 RepID=IF2_FLAJ1 0.0
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
Sma3: Translation initiation factor IF-2 1.145e-20
Internal
sp_v3.0_unigene153507 SustainPine v3.0 399
AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Dianthus caryophyllus RepID=IF5A_DIACA 7.0e-39
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
N-terminus
sp_v3.0_unigene153516 SustainPine v3.0 354
AutoFact: ribosomal protein S3 [Lethenteron japonicum] 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 40S ribosomal protein 2.625e-07
Internal
sp_v3.0_unigene153830 SustainPine v3.0 590
AutoFact: Probable translation initiation factor SUI1 n=2 Tax=Ustilaginaceae RepID=E7A0P1_9BASI 8.0e-35
FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
Sma3: Protein translation factor SUI1 homolog 8.28e-15
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain