Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Transketolase-like, pyrimidine-binding domain

Term: IPR005475  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1263 SustainPine v3.0 1894
AutoFact: Pyruvate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9S0Z5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3160 SustainPine v3.0 2620
AutoFact: 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] 0.0
FL-Next: tr=2-oxoglutarate dehydrogenase, putative; Ricinus communis (Castor bean). 0.0
Sma3: 2-oxoglutarate dehydrogenase, putative 1.003e-08
C-terminus
sp_v3.0_unigene6158 SustainPine v3.0 2647
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=3 Tax=Pinaceae RepID=A7LA01_PICAB 0.0
FL-Next: tr=Putative 1-D-deoxyxylulose 5-phosphate synthase type 2; Pinus densiflora (Japanese red pine). 0.0
Sma3: Putative 1-D-deoxyxylulose 5-phosphate synthase type 2 0.0
Complete
sp_v3.0_unigene6341 SustainPine v3.0 1682
AutoFact: Transketolase, putative n=1 Tax=Ricinus communis RepID=B9T0B2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transketolase 0.0
Internal
sp_v3.0_unigene6364 SustainPine v3.0 933
AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 5.0e-40
FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA binding protein, putative 1.132e-07
Putative N-terminus
sp_v3.0_unigene6855 SustainPine v3.0 1432
AutoFact: branched-chain alpha-keto acid decarboxylase E1 beta subunit [Arabidopsis thaliana] gb|AAD10651.1| branched-chain alpha-keto acid decarboxylase E1 beta subunit [Arabidopsis thaliana] gb|ABD59079.1| At1g55510 [Arabidopsis thaliana] gb|AEE33256.1| branched- 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr6 scaffold_3, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene8355 SustainPine v3.0 1094
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=1 Tax=Picea abies RepID=A7LA02_PICAB 0.0
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 3.555e-36
C-terminus
sp_v3.0_unigene13913 SustainPine v3.0 1674
AutoFact: 2-oxoglutarate dehydrogenase, E1 subunit [Dictyostelium discoideum AX4] sp|Q54JE4.1|ODO1_DICDI RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-k 0.0
FL-Next: tr=Predicted protein; Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga). 0.0
Sma3: 2-oxoglutarate dehydrogenase, putative 6.118e-09
C-terminus
sp_v3.0_unigene14764 SustainPine v3.0 2826
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type I n=3 Tax=Pinaceae RepID=A7LA00_PICAB 0.0
FL-Next: tr=Putative 1-D-deoxyxylulose 5-phosphate synthase type 1; Pinus densiflora (Japanese red pine). 0.0
Sma3: Putative 1-D-deoxyxylulose 5-phosphate synthase type 1 0.0
Complete
sp_v3.0_unigene15078 SustainPine v3.0 1299
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=1 Tax=Picea abies RepID=A7LA02_PICAB 0.0
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 1.386e-36
N-terminus
sp_v3.0_unigene17080 SustainPine v3.0 1971
AutoFact: pyruvate dehydrogenase E1 beta subunit isoform 2 [Zea mays] gb|AAC72193.1| pyruvate dehydrogenase E1 beta subunit isoform 2 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18402 SustainPine v3.0 1851
AutoFact: Pyruvate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9S0Z5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21257 SustainPine v3.0 858
AutoFact: Pyruvate dehydrogenase E1 beta subunit (Fragment) n=3 Tax=Picea RepID=O65087_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate dehydrogenase E1 component subunit beta 2.83062e-43
C-terminus
sp_v3.0_unigene28548 SustainPine v3.0 4032
AutoFact: 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] dbj|BAB10682.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gb|AAL67070.1| putative 2-oxoglutarate dehydrogenase E1 component [Arabidopsis thaliana] gb|AAM20281.1| put 0.0
FL-Next: tr=2-oxoglutarate dehydrogenase, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene37385 SustainPine v3.0 644
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type I n=3 Tax=Pinaceae RepID=A7LA00_PICAB 0.0
FL-Next: tr=Putative 1-D-deoxyxylulose 5-phosphate synthase type 1; Pinus densiflora (Japanese red pine). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 6.393e-33
Putative N-terminus
sp_v3.0_unigene39533 SustainPine v3.0 158
AutoFact: oxoglutarate dehydrogenase - like protein [Arabidopsis thaliana] 1.0e-18
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: 2-oxoglutarate dehydrogenase, E1 subunit 3.506e-09
Internal
sp_v3.0_unigene41190 SustainPine v3.0 161
AutoFact: putative transketolase [Oryza sativa Japonica Group] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TK 1.111e-11
Internal
sp_v3.0_unigene43830 SustainPine v3.0 135
AutoFact: 2-oxoglutarate dehydrogenase, E1 subunit n=5 Tax=Arabidopsis RepID=Q9ZRQ2_ARATH 3.0e-13
FL-Next: tr=E1 subunit of 2-oxoglutarate dehydrogenase; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene44687 SustainPine v3.0 160
AutoFact: oxoglutarate dehydrogenase - like protein [Arabidopsis thaliana] 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: 2-oxoglutarate dehydrogenase, E1 subunit 3.279e-09
Internal
sp_v3.0_unigene46111 SustainPine v3.0 348
AutoFact: Transketolase, putative n=1 Tax=Ricinus communis RepID=B9T0B2_RICCO 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TK 2.465e-22
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain