Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene28506 SustainPine v3.0 1068
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: PHD-finger family protein, expressed 9.412e-08
Internal
sp_v3.0_unigene28834 SustainPine v3.0 477
• AutoFact: DUF1423 domain containing protein 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potyvirus VPg interacting protein 9.359e-18
Internal
sp_v3.0_unigene29161 SustainPine v3.0 548
• AutoFact: trithorax, putative (EC:2.1.1.43) 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SET domain protein 3.506e-06
Putative Complete
sp_v3.0_unigene29272 SustainPine v3.0 729
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 1.359e-29
Putative C-terminus
sp_v3.0_unigene29947 SustainPine v3.0 1821
• AutoFact: Phd finger protein, putative n=1 Tax=Ricinus communis RepID=B9SP39_RICCO 6.0e-36
• FL-Next: sp=Histone-lysine N-methyltransferase ATX1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Trithorax-like protein, histone-lysine N-methyltransferase 9.017e-09
N-terminus
sp_v3.0_unigene31797 SustainPine v3.0 1010
• AutoFact: Inhibitor of growth protein, putative n=1 Tax=Ricinus communis RepID=B9RWQ1_RICCO 6.02558e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene34205 SustainPine v3.0 1130
• AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TSM0_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ebs-bah-phd domain-containing protein 1.022e-14
Complete
sp_v3.0_unigene34684 SustainPine v3.0 688
• AutoFact: PHD domain containing protein 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PHD finger protein 3.122e-33
C-terminus
sp_v3.0_unigene35653 SustainPine v3.0 1390
• AutoFact: putative protein phosphatase 2C 15 [Arabidopsis thaliana] ref|NP_001031252.1| putative protein phosphatase 2C 15 [Arabidopsis thaliana] sp|Q9M9C6.1|P2C15_ARATH RecName: Full=Probable protein phosphatase 2C 15; Short=AtPP2C15 gb|AAF26041.1|AC015986_4 putat 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase, putative 3.214e-11
C-terminus
sp_v3.0_unigene36128 SustainPine v3.0 548
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potyvirus VPg interacting protein 1.696e-09
N-terminus
sp_v3.0_unigene36138 SustainPine v3.0 767
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 7.033e-22
Internal
sp_v3.0_unigene36437 SustainPine v3.0 744
• AutoFact: S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb|AAV68853.1| hypothetical protein AT1G73320 [Arabidopsis thaliana] gb|AAX55099.1| hypothetical protein At1g73320 [Arabidopsis thaliana] gb|AEE35441.1| S-ad 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene36820 SustainPine v3.0 2600
• AutoFact: putative methyltransferase PMT21 [Arabidopsis thaliana] ref|NP_849408.1| putative methyltransferase PMT21 [Arabidopsis thaliana] sp|Q94II3.1|PMTL_ARATH RecName: Full=Probable methyltransferase PMT21; AltName: Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 3 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 3.952e-22
Complete
sp_v3.0_unigene37371 SustainPine v3.0 707
• AutoFact: ZZ domain containing protein 4.0e-07
• FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
• Sma3: Histone acetyltransferase 4.541e-11
Internal
sp_v3.0_unigene37430 SustainPine v3.0 627
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene37789 SustainPine v3.0 1779
• AutoFact: PHD finger/nucleic acid binding protein [Olimarabidopsis pumila] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene38747 SustainPine v3.0 2166
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene38920 SustainPine v3.0 412
• AutoFact: Trithorax-like protein, histone-lysine N-methyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SM72_PHYPA 4.0e-39
• FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Trithorax-like protein, histone-lysine N-methyltransferase 1.183e-12
Internal
sp_v3.0_unigene38988 SustainPine v3.0 758
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SN69_RICCO 3.0e-20
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene39000 SustainPine v3.0 624
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCC0_RICCO 0.0
• FL-Next: sp=Probable lysine-specific demethylase JMJ14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain