Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene194612 SustainPine v3.0 197
AutoFact: RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4II36_ARATH 5.0e-14
FL-Next: tr=RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene195152 SustainPine v3.0 290
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SNH5_RICCO 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene196430 SustainPine v3.0 401
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 2.00386e-43
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Sma3: p300/CBP acetyltransferase-related protein 8.619e-09
C-terminus
sp_v3.0_unigene197768 SustainPine v3.0 283
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene205891 SustainPine v3.0 583
AutoFact: Membrane protein n=1 Tax=Zea mays RepID=B6UFS0_MAIZE 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Membrane protein 4.865e-16
Putative Complete
sp_v3.0_unigene208356 SustainPine v3.0 191
AutoFact: fimbrin-like protein 2 [Arabidopsis thaliana] sp|Q9FKI0.1|FIMB2_ARATH RecName: Full=Fimbrin-like protein 2 dbj|BAB09267.1| fimbrin [Arabidopsis thaliana] gb|AAK76454.1| putative fimbrin protein [Arabidopsis thaliana] gb|AAN13139.1| putative fimbrin protei 2.0e-21
FL-Next: sp=Fimbrin-like protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Fimbrin, putative 8.192e-13
Internal
sp_v3.0_unigene208568 SustainPine v3.0 395
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB03019.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67115.1| PHD-finger protein, putative [Arabidopsis thaliana] gb|ABD94083.1| At3g24010 [Arabidopsis thaliana] dbj|BAH30 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative PHD-finger protein 2.594e-09
Putative C-terminus
sp_v3.0_unigene208601 SustainPine v3.0 221
AutoFact: putative alfin-like transcription factor [Solanum tuberosum] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PHD5 6.904e-09
Internal
sp_v3.0_unigene208703 SustainPine v3.0 323
AutoFact: PHD domain containing protein 2.0e-10
FL-Next: sp=Homeobox protein HOX1A; Zea mays (Maize). 0.0
Sma3: Pathogenesis-related homeodomain protein 1.514e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain