Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene131925 SustainPine v3.0 370
AutoFact: DUF248 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin protein kinase-like 4.587e-18
Internal
sp_v3.0_unigene131964 SustainPine v3.0 364
AutoFact: Phd/F-box containing protein, putative n=1 Tax=Ricinus communis RepID=B9SQ16_RICCO 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PHD finger protein 1.047e-09
C-terminus
sp_v3.0_unigene132535 SustainPine v3.0 279
AutoFact: Inhibitor of growth protein, putative n=1 Tax=Ricinus communis RepID=B9RWQ1_RICCO 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene132797 SustainPine v3.0 531
AutoFact: pfam00097, zf-C3HC4, Zinc finger, C3HC4 type (RING finger) 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene133034 SustainPine v3.0 465
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 1.062e-24
Internal
sp_v3.0_unigene133177 SustainPine v3.0 174
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 6.0e-22
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Sma3: p300/CBP acetyltransferase-related protein 5.451e-09
Internal
sp_v3.0_unigene137249 SustainPine v3.0 249
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 1.117e-23
Internal
sp_v3.0_unigene137336 SustainPine v3.0 316
AutoFact: putative methyltransferase PMT17 [Arabidopsis thaliana] sp|Q9SZX8.1|PMTH_ARATH RecName: Full=Probable methyltransferase PMT17 emb|CAB40037.1| putative protein [Arabidopsis thaliana] emb|CAB78167.1| putative protein [Arabidopsis thaliana] gb|AEE82883.1| pu 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 3.362e-20
Internal
sp_v3.0_unigene137534 SustainPine v3.0 414
AutoFact: RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4II36_ARATH 2.0e-27
FL-Next: tr=RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2/SWI2 family global transcription factor 8.772e-06
Internal
sp_v3.0_unigene137750 SustainPine v3.0 190
AutoFact: histone-lysine N-methyltransferase ATX3 [Arabidopsis thaliana] sp|Q9M364.2|ATX3_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX3; AltName: Full=Protein SET DOMAIN GROUP 14; AltName: Full=Trithorax-homolog protein 3; Short=TRX-homolog protein 3 4.0e-17
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 2.977e-06
Internal
sp_v3.0_unigene140434 SustainPine v3.0 802
AutoFact: Pyruvate kinase n=2 Tax=Picea sitchensis RepID=A9NUL1_PICSI 0.0
FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate kinase 3.92223e-42
N-terminus
sp_v3.0_unigene140547 SustainPine v3.0 977
AutoFact: DC1 domain-containing protein [Arabidopsis thaliana] gb|AEE30051.1| DC1 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F9H16.2 protein 7.31e-06
Putative Complete
sp_v3.0_unigene142312 SustainPine v3.0 1345
AutoFact: putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_849736.1| putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_973949.1| putative methyltransferase PMT20 [Arabidopsis thaliana] sp|Q9C6S7.1|PMTK_ARATH RecName: Full=Probable methylt 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin protein kinase-like 3.824e-18
Internal
sp_v3.0_unigene143351 SustainPine v3.0 333
AutoFact: Pyruvate kinase n=2 Tax=Picea sitchensis RepID=A9NUL1_PICSI 3.0e-34
FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate kinase 0.0
N-terminus
sp_v3.0_unigene145542 SustainPine v3.0 1135
AutoFact: protein alfin-like 6 [Arabidopsis thaliana] gb|AAM15031.1| putative PHD-type zinc finger protein [Arabidopsis thaliana] gb|AAO41953.1| putative PHD-type zinc finger protein [Arabidopsis thaliana] gb|AAO50537.1| putative PHD-type zinc finger protein [Arabi 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PHD finger protein 1.746e-29
Putative Complete
sp_v3.0_unigene145656 SustainPine v3.0 352
AutoFact: alfin-like 5 protein [Arabidopsis thaliana] gb|AAV31167.1| At5g20510 [Arabidopsis thaliana] gb|AAW39006.1| At5g20510 [Arabidopsis thaliana] gb|AED92854.1| alfin-like 5 protein [Arabidopsis thaliana] 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene146829 SustainPine v3.0 859
AutoFact: Protein phosphatase 2C ABI2 n=3 Tax=Andropogoneae RepID=B6U1A8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase, putative 2.58e-11
Internal
sp_v3.0_unigene146886 SustainPine v3.0 599
AutoFact: putative protein phosphatase 2C 15 [Arabidopsis thaliana] ref|NP_001031252.1| putative protein phosphatase 2C 15 [Arabidopsis thaliana] sp|Q9M9C6.1|P2C15_ARATH RecName: Full=Probable protein phosphatase 2C 15; Short=AtPP2C15 gb|AAF26041.1|AC015986_4 putat 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase, putative 2.831e-11
Internal
sp_v3.0_unigene146964 SustainPine v3.0 611
AutoFact: Probable protein phosphatase 2C 3 n=4 Tax=BEP clade RepID=P2C03_ORYSJ 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene147008 SustainPine v3.0 609
AutoFact: putative protein phosphatase 2C 15 [Arabidopsis thaliana] ref|NP_001031252.1| putative protein phosphatase 2C 15 [Arabidopsis thaliana] sp|Q9M9C6.1|P2C15_ARATH RecName: Full=Probable protein phosphatase 2C 15; Short=AtPP2C15 gb|AAF26041.1|AC015986_4 putat 8.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase, putative 2.662e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain