Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene103270 SustainPine v3.0 430
• AutoFact: pfam12738, PTCB-BRCT, twin BRCT domain 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene103439 SustainPine v3.0 368
• AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 0.0
• FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Histone acetyltransferase 2.336e-11
Internal
sp_v3.0_unigene103765 SustainPine v3.0 445
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N3S4_POPTR 8.00001e-41
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromatin remodeling complex subunit 2.453e-06
Internal
sp_v3.0_unigene103778 SustainPine v3.0 575
• AutoFact: Unassigned protein
• FL-Next: tr=Strawberry notch-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene103811 SustainPine v3.0 507
• AutoFact: histone-lysine N-methyltransferase ATX5 [Arabidopsis thaliana] sp|Q8GZ42.1|ATX5_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX5; AltName: Full=Protein SET DOMAIN GROUP 29; AltName: Full=Trithorax-homolog protein 5; Short=TRX-homolog protein 5 0.0
• FL-Next: sp=Histone-lysine N-methyltransferase ATX5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Trithorax, putative 1.538e-08
Internal
sp_v3.0_unigene104073 SustainPine v3.0 553
• AutoFact: pfam00628, PHD, PHD-finger 2.0e-06
• FL-Next: sp=Histone acetyltransferase HAC4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104254 SustainPine v3.0 954
• AutoFact: putative DNA helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA Helicase 2.996e-17
Putative C-terminus
sp_v3.0_unigene104291 SustainPine v3.0 506
• AutoFact: JmjC domain containing protein 7.0e-36
• FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Jumonji domain protein 4.055e-23
Internal
sp_v3.0_unigene104491 SustainPine v3.0 491
• AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2 family DNA-dependent ATPase 3.928e-26
Internal
sp_v3.0_unigene104592 SustainPine v3.0 687
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-19
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104752 SustainPine v3.0 483
• AutoFact: SWIB/MDM2 and Plus-3 and GYF domain-containing protein [Arabidopsis thaliana] sp|Q9FT92.2|Y5843_ARATH RecName: Full=Uncharacterized protein At5g08430 gb|ACF06124.1| At5g08430 [Arabidopsis thaliana] gb|AED91300.1| SWIB/MDM2 and Plus-3 and GYF domain-contai 3.0e-23
• FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105091 SustainPine v3.0 484
• AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 5.0e-29
• FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: p300/CBP acetyltransferase-related protein 5.379e-09
Putative C-terminus
sp_v3.0_unigene105150 SustainPine v3.0 294
• AutoFact: putative methyltransferase PMT11 [Arabidopsis thaliana] sp|O22285.1|PMTB_ARATH RecName: Full=Probable methyltransferase PMT11 gb|AAB87124.1| expressed protein [Arabidopsis thaliana] gb|AAK96646.1| At2g39750/T5I7.5 [Arabidopsis thaliana] gb|AAM70566.1| At2 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ankyrin-like protein 6.927e-16
Internal
sp_v3.0_unigene105368 SustainPine v3.0 217
• AutoFact: Snf2 histone linker phd ring helicase, putative n=1 Tax=Ricinus communis RepID=B9S4G9_RICCO 2.0e-17
• FL-Next: tr=Snf2 histone linker phd ring helicase, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene105716 SustainPine v3.0 374
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GVF7_POPTR 2.0e-28
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromatin remodeling complex subunit 1.935e-06
Internal
sp_v3.0_unigene105994 SustainPine v3.0 433
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S456_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ankyrin-like protein 2.42e-19
Internal
sp_v3.0_unigene106203 SustainPine v3.0 195
• AutoFact: F21M11.4 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZWC2_ARATH 6.0e-19
• FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Brca1 associated ring domain, putative 5.167e-09
Internal
sp_v3.0_unigene106254 SustainPine v3.0 561
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S7K7_RICCO 0.0
• FL-Next: sp=Probable lysine-specific demethylase JMJ14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Jumonji domain protein 1.524e-19
Internal
sp_v3.0_unigene106377 SustainPine v3.0 532
• AutoFact: SW2/SNF2 family-like protein n=1 Tax=Populus trichocarpa RepID=B9N1U6_POPTR 9.0e-35
• FL-Next: tr=SW2/SNF2 family-like protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene106474 SustainPine v3.0 154
• AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IDS5_POPTR 4.0e-21
• FL-Next: sp=Histone-lysine N-methyltransferase ATX4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Trithorax, putative 1.538e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain