Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene62023 SustainPine v3.0 198
AutoFact: Peroxisomal membrane ABC transporter family, PMP family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HYE2_POPTR 2.0e-23
FL-Next: sp=ABC transporter D family member 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62434 SustainPine v3.0 185
AutoFact: Histone acetyltransferase n=1 Tax=Populus trichocarpa RepID=B9N5C8_POPTR 5.0e-16
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: p300/CBP acetyltransferase-related protein 7.232e-09
Internal
sp_v3.0_unigene62819 SustainPine v3.0 238
AutoFact: Similarity to 26S proteasome subunit 4 n=2 Tax=Arabidopsis thaliana RepID=Q9LIM2_ARATH 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain protein 3.642e-08
Internal
sp_v3.0_unigene62876 SustainPine v3.0 190
AutoFact: Ebs-bah-phd domain-containing protein n=2 Tax=Populus trichocarpa RepID=B9HZB2_POPTR 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ebs-bah-phd domain-containing protein 6.898e-15
Internal
sp_v3.0_unigene62927 SustainPine v3.0 249
AutoFact: Histone-lysine N-methyltransferase ASHR3 n=2 Tax=Arabidopsis RepID=ASHR3_ARATH 1.0e-08
FL-Next: sp=Histone-lysine N-methyltransferase ASHR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene63593 SustainPine v3.0 220
AutoFact: JmjN domain containing protein 1.0e-12
FL-Next: sp=Probable lysine-specific demethylase JMJ14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Jumonji domain protein 2.345e-17
Internal
sp_v3.0_unigene63829 SustainPine v3.0 178
AutoFact: histone-lysine N-methyltransferase ASHR3 [Arabidopsis thaliana] sp|Q949T8.1|ASHR3_ARATH RecName: Full=Histone-lysine N-methyltransferase ASHR3; AltName: Full=ASH1-related protein 3; AltName: Full=Protein SET DOMAIN GROUP 4; AltName: Full=Protein stamen lo 4.0e-10
FL-Next: sp=Histone-lysine N-methyltransferase ASHR3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64835 SustainPine v3.0 198
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene66278 SustainPine v3.0 416
AutoFact: Unassigned protein
FL-Next: tr=Chromodomain helicase-DNA-binding protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene66600 SustainPine v3.0 174
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SNH5_RICCO 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 9.279e-06
Internal
sp_v3.0_unigene66722 SustainPine v3.0 188
AutoFact: PREDICTED: similar to CTD-binding SR-like protein rA9 [Canis familiaris] 8.0e-07
FL-Next: tr=Putative uncharacterized protein Sb01g037640; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene66889 SustainPine v3.0 381
AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Sma3: Putative IDN3 protein isoform A 8.285e-06
Internal
sp_v3.0_unigene67240 SustainPine v3.0 144
AutoFact: Histone-lysine N-methyltransferase n=3 Tax=Andropogoneae RepID=C5XT28_SORBI 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone-lysine N-methyltransferase ATXR6, putative 5.379e-09
Internal
sp_v3.0_unigene67268 SustainPine v3.0 232
AutoFact: E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] ref|NP_001119465.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97324.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97328.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] 3.0e-09
FL-Next: Isoform 2 of E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 0.0
Internal
sp_v3.0_unigene68269 SustainPine v3.0 211
AutoFact: PHD finger protein [Arabidopsis thaliana] sp|Q9C810.1|Y1342_ARATH RecName: Full=PHD finger protein At1g33420 gb|AAG51204.1|AC051630_1 hypothetical protein; 47104-44821 [Arabidopsis thaliana] gb|AAK59559.1| unknown protein [Arabidopsis thaliana] gb|AAK9373 5.0e-17
FL-Next: sp=PHD finger protein At1g33420; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene69090 SustainPine v3.0 286
AutoFact: Jumonji domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GWH9_POPTR 1.0e-15
FL-Next: sp=High mobility group B protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene69174 SustainPine v3.0 167
AutoFact: acyl-CoA sterol acyl transferase 1 [Arabidopsis thaliana] sp|Q9SV07.1|ASAT1_ARATH RecName: Full=Acyl-CoA--sterol O-acyltransferase 1; AltName: Full=Sterol O-acyltransferase 1 emb|CAB41317.1| hypothetical protein [Arabidopsis thaliana] gb|AAQ65159.1| At3g5 3.0e-07
FL-Next: sp=Acyl-CoA--sterol O-acyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Acyltransferase, putative 1.367e-07
Internal
sp_v3.0_unigene70073 SustainPine v3.0 370
AutoFact: Histone methylase n=2 Tax=Andropogoneae RepID=B3VSN3_MAIZE 1.0e-27
FL-Next: sp=Histone-lysine N-methyltransferase ATX5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Trithorax, putative 1.443e-08
C-terminus
sp_v3.0_unigene70411 SustainPine v3.0 207
AutoFact: Chromatin-remodeling factor CHD3 n=5 Tax=Oryza sativa RepID=Q5SML0_ORYSJ 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family chromodomain-helicase 4.19e-08
Internal
sp_v3.0_unigene70439 SustainPine v3.0 240
AutoFact: Unassigned protein 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain