Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene53073 SustainPine v3.0 245
AutoFact: PHD domain containing protein 3.0e-07
FL-Next: sp=PHD finger protein At2g01810; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: PHD-finger family protein, expressed 2.09e-07
Putative C-terminus
sp_v3.0_unigene54098 SustainPine v3.0 424
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene54297 SustainPine v3.0 471
AutoFact: putative PHD finger transcription factor [Arabidopsis thaliana] gb|AED97076.1| putative PHD finger transcription factor [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene54757 SustainPine v3.0 262
AutoFact: putative serine/threonine-specific protein kinase [Oryza sativa Japonica Group] gb|EAZ41462.1| hypothetical protein OsJ_25984 [Oryza sativa Japonica Group] dbj|BAH00920.1| unnamed protein product [Oryza sativa Japonica Group] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-specific protein kinase-like protein 5.097e-08
Internal
sp_v3.0_unigene55431 SustainPine v3.0 369
unknown
sp_v3.0_unigene56115 SustainPine v3.0 204
AutoFact: Unassigned protein
FL-Next: sp=PHD finger protein MALE STERILITY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Os09g0449000 protein 9.26e-06
Internal
sp_v3.0_unigene56936 SustainPine v3.0 410
AutoFact: Probable protein phosphatase 2C 15 n=3 Tax=Arabidopsis RepID=P2C15_ARATH 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase, putative 2.81e-11
Internal
sp_v3.0_unigene57119 SustainPine v3.0 322
AutoFact: Isoform 2 of Protein OBERON 4 n=1 Tax=Arabidopsis thaliana RepID=Q84TI3-2 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CONSTANS interacting protein 6 2.643e-09
Internal
sp_v3.0_unigene57177 SustainPine v3.0 375
AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene57440 SustainPine v3.0 475
AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 3.0e-28
FL-Next: sp=Histone-lysine N-methyltransferase ATX5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene58465 SustainPine v3.0 158
AutoFact: DUF3594 domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58691 SustainPine v3.0 203
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58793 SustainPine v3.0 440
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI 1.0e-31
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone-lysine N-methyltransferase 1.539e-09
Internal
sp_v3.0_unigene59294 SustainPine v3.0 377
AutoFact: PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] dbj|BAD95354.1| receptor like protein [Arabidopsis thaliana] gb|AEE84563.1| PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ebs-bah-phd domain-containing protein 1.599e-15
C-terminus
sp_v3.0_unigene59329 SustainPine v3.0 291
AutoFact: transcription factor jumonji and C5HC2 type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAC12829.1| unknown protein [Arabidopsis thaliana] gb|AEC09034.1| transcription factor jumonji and C5HC2 type zinc finger domain-containing protein 3.0e-28
FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
Sma3: Jumonji domain protein 3.466e-24
Internal
sp_v3.0_unigene59384 SustainPine v3.0 183
AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene59898 SustainPine v3.0 390
AutoFact: Pearli, putative n=1 Tax=Ricinus communis RepID=B9SJD1_RICCO 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene61325 SustainPine v3.0 157
AutoFact: protein-serine/threonine kinase [Nicotiana tabacum] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-specific protein kinase-like protein 3.279e-08
Internal
sp_v3.0_unigene61711 SustainPine v3.0 340
AutoFact: Putative sno protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7F1V5_ORYSJ 1.0e-15
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene61993 SustainPine v3.0 324
AutoFact: p300/CBP acetyltransferase-related protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TAD6_PHYPA 8.0e-35
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Sma3: p300/CBP acetyltransferase-related protein 1.283e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain