Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11573 SustainPine v3.0 1087
• AutoFact: Unassigned protein
• FL-Next: sp=F-box/LRR-repeat protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene11576 SustainPine v3.0 1444
• AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RR38_SELML 0.0
• FL-Next: tr=ABC transporter B family member; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Complete
sp_v3.0_unigene11811 SustainPine v3.0 1356
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.036e-27
Complete
sp_v3.0_unigene11843 SustainPine v3.0 1542
• AutoFact: F-box protein SKIP5 [Arabidopsis thaliana] sp|Q94FT2.1|SKIP5_ARATH RecName: Full=F-box protein SKIP5; AltName: Full=SKP1-interacting partner 5 gb|AAK61345.1|AF347972_1 SKP1-interacting partner 5 [Arabidopsis thaliana] gb|AAM61599.1| SKP1 interacting partn 0.0
• FL-Next: sp=F-box protein SKIP5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene11910 SustainPine v3.0 1059
• AutoFact: putative F-box/kelch-repeat protein [Arabidopsis thaliana] sp|O49488.1|FBK93_ARATH RecName: Full=Putative F-box/kelch-repeat protein At4g34170 emb|CAA17555.1| putative protein [Arabidopsis thaliana] emb|CAB80134.1| putative protein [Arabidopsis thaliana] 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene11924 SustainPine v3.0 1985
• AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q9STN5.1|Y4833_ARATH RecName: Full=Uncharacterized protein At4g08330, chloroplastic; Flags: Precursor emb|CAB52555.1| putative protein [Arabidopsis thaliana] emb|CAB77958.1| putative protein [Arabidopsis t 3.0e-26
• FL-Next: sp=Uncharacterized protein At4g08330, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v3.0_unigene12100 SustainPine v3.0 636
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 1.578e-33
C-terminus
sp_v3.0_unigene12214 SustainPine v3.0 973
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 4.54e-11
Putative C-terminus
sp_v3.0_unigene12369 SustainPine v3.0 672
• AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene12457 SustainPine v3.0 1975
• AutoFact: MYB transcription factor [Hevea brasiliensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 1.067e-25
Complete
sp_v3.0_unigene12608 SustainPine v3.0 795
• AutoFact: ATP-dependent DNA helicase Q-like 3 n=2 Tax=Arabidopsis thaliana RepID=RQL3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent DNA helicase, RecQ family protein, expressed 3.136e-14
Internal
sp_v3.0_unigene12690 SustainPine v3.0 1029
• AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9HCN7_POPTR 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene12701 SustainPine v3.0 2586
• AutoFact: pfam02364, Glucan_synthase, 1,3-beta-glucan synthase component 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 1,3-beta-glucan synthase 2.387e-37
Complete
sp_v3.0_unigene12900 SustainPine v3.0 751
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box protein At2g02240 gb|AEC05560.1| F-box protein [Arabidopsis thaliana] 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_261, whole genome shotgun sequence 7.889e-15
N-terminus
sp_v3.0_unigene12921 SustainPine v3.0 1828
• AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9HSY9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene13116 SustainPine v3.0 1137
• AutoFact: F-box/leucine rich repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SRD2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene13239 SustainPine v3.0 815
• AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene13290 SustainPine v3.0 910
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box protein At2g02240 gb|AEC05560.1| F-box protein [Arabidopsis thaliana] 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Non-S-locus F-box-like protein 2011 4.873e-06
Putative Complete
sp_v3.0_unigene13304 SustainPine v3.0 2375
• AutoFact: F-box protein At-B [Arabidopsis thaliana] sp|Q9ZWC6.1|ATB_ARATH RecName: Full=F-box protein At-B gb|AAF79512.1|AC002328_20 F20N2.2 [Arabidopsis thaliana] gb|AAM26672.1| At1g55590/F20N2_18 [Arabidopsis thaliana] gb|AAN46816.1| At1g55590/F20N2_18 [Arabidops 0.0
• FL-Next: sp=F-box protein At-B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene13446 SustainPine v3.0 695
• AutoFact: 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] dbj|BAC01168.1| 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Callose synthase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 1,3-beta-glucan synthase 1.021e-37
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain