Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene7817 SustainPine v3.0 1951
• AutoFact: F-box family protein 0.0
• FL-Next: sp=F-box/LRR-repeat protein At1g67190; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_87, whole genome shotgun sequence 3.4e-06
Complete
sp_v3.0_unigene7826 SustainPine v3.0 1990
• AutoFact: Unassigned protein
• FL-Next: sp=F-box protein FBW2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin-protein ligase 3.466e-07
Complete
sp_v3.0_unigene7887 SustainPine v3.0 2289
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
• Sma3: TIR1-like protein 9.664e-20
Putative Complete
sp_v3.0_unigene7893 SustainPine v3.0 1513
• AutoFact: F-box family protein n=1 Tax=Citrus trifoliata RepID=B8Y9B5_PONTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box family protein 9.983e-09
Complete
sp_v3.0_unigene8043 SustainPine v3.0 754
• AutoFact: pfam01344, Kelch_1, Kelch motif 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene8116 SustainPine v3.0 2101
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FNK5.1|FB285_ARATH RecName: Full=F-box protein At5g46170 dbj|BAB08262.1| unnamed protein product [Arabidopsis thaliana] gb|AAL49842.1| unknown protein [Arabidopsis thaliana] gb|AAN13195.1| unknown protein [Arabido 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8124 SustainPine v3.0 2208
• AutoFact: O-FucT domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative auxin-independent growth promoter 1.485e-25
C-terminus
sp_v3.0_unigene8134 SustainPine v3.0 2930
• AutoFact: cullin-like protein1 [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin-1, putative 2.754e-08
Complete
sp_v3.0_unigene8169 SustainPine v3.0 1953
• AutoFact: PREDICTED: similar to F-box-containing protein 2 n=2 Tax=Vitis vinifera RepID=UPI000198358B 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr5 scaffold_253, whole genome shotgun sequence 4.505e-15
Complete
sp_v3.0_unigene8379 SustainPine v3.0 1303
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FGN3.1|FB290_ARATH RecName: Full=F-box protein At5g51380 dbj|BAB09749.1| unnamed protein product [Arabidopsis thaliana] gb|AAV84497.1| At5g51380 [Arabidopsis thaliana] gb|AAW30025.1| At5g51380 [Arabidopsis thalian 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene8459 SustainPine v3.0 1368
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FLX3.1|FB293_ARATH RecName: Full=F-box protein At5g52880 dbj|BAB10436.1| unnamed protein product [Arabidopsis thaliana] gb|AAL06941.1| AT5g52880/MXC20_10 [Arabidopsis thaliana] gb|AAM91039.1| AT5g52880/MXC20_10 [A 0.0
• FL-Next: sp=F-box protein At5g52880; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene8537 SustainPine v3.0 2314
• AutoFact: rve multi-domain protein 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene8635 SustainPine v3.0 1734
• AutoFact: ATPP2-A13, putative n=1 Tax=Ricinus communis RepID=B9SRL8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8710 SustainPine v3.0 862
• AutoFact: SMC_N multi-domain protein 1.0e-11
• FL-Next: sp=Uncharacterized protein At1g10890; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene8714 SustainPine v3.0 1309
• AutoFact: calmodulin-binding protein [Arabidopsis thaliana] gb|AAF28348.1| calmodulin-binding protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AAA ATPase, central region 3.222e-07
C-terminus
sp_v3.0_unigene8769 SustainPine v3.0 1525
• AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYND finger family protein 5.521e-08
Putative Complete
sp_v3.0_unigene8983 SustainPine v3.0 922
• AutoFact: pfam00646, F-box, F-box domain 0.0001
• FL-Next: sp=F-box/LRR-repeat protein At5g63520; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene8988 SustainPine v3.0 383
• AutoFact: F-box/kelch-repeat protein SKIP6 [Arabidopsis thaliana] sp|Q9SJ04.1|SKIP6_ARATH RecName: Full=F-box/kelch-repeat protein SKIP6; AltName: Full=SKP1-interacting partner 6 gb|AAD20412.1| SKP1 interacting partner 6 (SKIP6), putative [Arabidopsis thaliana] gb| 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene9257 SustainPine v3.0 1975
• AutoFact: F-box family protein-like [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box family protein-like 3.19e-08
Complete
sp_v3.0_unigene9345 SustainPine v3.0 1490
• AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYND finger family protein 5.7e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain