Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene45998 SustainPine v3.0 148
AutoFact: Arf domain containing protein 9.0e-08
unknown
sp_v3.0_unigene46630 SustainPine v3.0 1076
AutoFact: AP-2 complex subunit sigma [Arabidopsis thaliana] ref|XP_002894072.1| hypothetical protein ARALYDRAFT_891585 [Arabidopsis lyrata subsp. lyrata] sp|Q84WL9.1|AP2S_ARATH RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adapter-related protein complex 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene48148 SustainPine v3.0 344
AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 1.0e-18
FL-Next: Isoform 2 of B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 0.0
Internal
sp_v3.0_unigene48269 SustainPine v3.0 275
AutoFact: putative AP3-complex beta-3A adaptin subunit [Arabidopsis thaliana] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene50195 SustainPine v3.0 434
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 1.0e-24
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer alpha subunit, putative 4.17e-09
C-terminus
sp_v3.0_unigene51098 SustainPine v3.0 196
AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 1.0e-11
FL-Next: Isoform 2 of B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 0.0
Internal
sp_v3.0_unigene51155 SustainPine v3.0 129
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene51865 SustainPine v3.0 377
AutoFact: Coatomer subunit alpha-2 n=4 Tax=Arabidopsis RepID=COPA2_ARATH 8.0e-22
FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer alpha subunit, putative 4.891e-09
Internal
sp_v3.0_unigene52096 SustainPine v3.0 338
AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 3.0e-19
FL-Next: sp=Coatomer subunit gamma; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit gamma 1.328e-08
Internal
sp_v3.0_unigene52431 SustainPine v3.0 282
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QU61_ORYSJ 3.0e-20
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.391e-09
Internal
sp_v3.0_unigene52555 SustainPine v3.0 329
AutoFact: a dynamin-like protein ADL3 [Arabidopsis thaliana] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin-2A 3.475e-08
Putative N-terminus
sp_v3.0_unigene53239 SustainPine v3.0 215
AutoFact: syntaxin [Nicotiana benthamiana] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin, putative 7.704e-07
Internal
sp_v3.0_unigene53412 SustainPine v3.0 203
AutoFact: Nonclathrin coat protein zeta1-COP n=4 Tax=Zea mays RepID=Q9MAY9_MAIZE 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit zeta-1 1.137e-14
N-terminus
sp_v3.0_unigene54121 SustainPine v3.0 196
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.101e-11
Internal
sp_v3.0_unigene54164 SustainPine v3.0 492
AutoFact: Microtubule organization protein n=2 Tax=Populus trichocarpa RepID=B9GIF2_POPTR 2.0e-23
FL-Next: sp=Protein MOR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Microtubule organization protein 9.88e-10
Internal
sp_v3.0_unigene54628 SustainPine v3.0 357
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9RN42_RICCO 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene55506 SustainPine v3.0 437
AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QQD0_ORYSJ 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.475e-09
Internal
sp_v3.0_unigene55571 SustainPine v3.0 321
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.442e-33
Internal
sp_v3.0_unigene55895 SustainPine v3.0 348
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q94LP8_ORYSJ 3.0e-21
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.228e-11
Internal
sp_v3.0_unigene56109 SustainPine v3.0 379
AutoFact: alpha-adaptin C homolog [Arabidopsis thaliana] 5.0e-35
FL-Next: Isoform 3 of AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR 0.0
Sma3: Alpha-adaptin 3.157e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain