Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene26554 SustainPine v3.0 606
AutoFact: AP-1 complex subunit sigma-2 n=2 Tax=Dictyostelium RepID=AP1S2_DICDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 2.819e-08
Complete
sp_v3.0_unigene26617 SustainPine v3.0 756
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin-71 5.817e-09
Putative C-terminus
sp_v3.0_unigene27512 SustainPine v3.0 2022
AutoFact: ARF-GAP protein n=1 Tax=Phytolacca acinosa RepID=E7BQV8_PHYAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ARF GTPase activator, putative 7.767e-14
Complete
sp_v3.0_unigene28916 SustainPine v3.0 2682
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29305 SustainPine v3.0 652
AutoFact: Syntaxin, putative n=1 Tax=Ricinus communis RepID=B9RFG2_RICCO 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Qa-SNARE, SYP4/Tlg2p/Syntaxin 16-type 6.823e-09
C-terminus
sp_v3.0_unigene30279 SustainPine v3.0 558
AutoFact: gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.425e-17
Internal
sp_v3.0_unigene30353 SustainPine v3.0 1083
AutoFact: GTP-binding protein [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30387 SustainPine v3.0 1167
AutoFact: golgi SNAP receptor complex member 2 [Arabidopsis thaliana] sp|Q9SJL6.1|MEM11_ARATH RecName: Full=Membrin-11; Short=AtMEMB11; AltName: Full=27 kDa Golgi SNARE protein; AltName: Full=Golgi SNAP receptor complex member 2-1 gb|AAD31575.1| putative cis-Golgi 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Membrin, putative 1.777e-09
Complete
sp_v3.0_unigene30412 SustainPine v3.0 990
AutoFact: AP-2 complex subunit sigma [Arabidopsis thaliana] ref|XP_002894072.1| hypothetical protein ARALYDRAFT_891585 [Arabidopsis lyrata subsp. lyrata] sp|Q84WL9.1|AP2S_ARATH RecName: Full=AP-2 complex subunit sigma; AltName: Full=Adapter-related protein complex 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30647 SustainPine v3.0 1394
AutoFact: GTP-binding protein SAR1A n=5 Tax=Embryophyta RepID=B4FPT6_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31325 SustainPine v3.0 767
AutoFact: Small Ras GTP-binding nuclear protein (Fragment) n=3 Tax=Spermatophyta RepID=F5ANW7_9ROSI 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran-like small GTPase 7.31e-06
Putative Complete
sp_v3.0_unigene32793 SustainPine v3.0 583
AutoFact: pfam09177, Syntaxin-6_N, Syntaxin 6, N-terminal 4.0e-07
FL-Next: sp=Syntaxin-61; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene32961 SustainPine v3.0 863
AutoFact: COPZ2; Zeta2-COP 2.0e-10
FL-Next: tr=Putative uncharacterized protein Sb01g000630; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Complete
sp_v3.0_unigene34211 SustainPine v3.0 875
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Protein transport protein sec23, putative 5.786e-11
Internal
sp_v3.0_unigene34701 SustainPine v3.0 940
AutoFact: sec23/sec24 transport family protein [Arabidopsis thaliana] gb|AAD15598.1| expressed protein [Arabidopsis thaliana] gb|AAK96686.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56782.1| At2g27460 [Arabidopsis thaliana] gb|AEC07999.1| sec23/sec24 transport 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene34769 SustainPine v3.0 480
AutoFact: VHS domain containing protein 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein transporter 8.575e-11
N-terminus
sp_v3.0_unigene34822 SustainPine v3.0 1728
AutoFact: B-cell receptor-associated protein 31-like containing protein n=5 Tax=Andropogoneae RepID=B6U1I6_MAIZE 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bcr-associated protein, bap, putative 1.217e-12
Complete
sp_v3.0_unigene36331 SustainPine v3.0 1433
AutoFact: GTP-binding protein SAR1A n=5 Tax=Embryophyta RepID=B4FPT6_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene36620 SustainPine v3.0 1396
AutoFact: Golgi snare 11 protein, putative n=1 Tax=Ricinus communis RepID=B9SMU4_RICCO 0.0
FL-Next: sp=Golgi SNAP receptor complex member 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene37027 SustainPine v3.0 878
AutoFact: coatomer subunit alpha-1 [Arabidopsis thaliana] sp|Q94A40.2|COPA1_ARATH RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1 gb|AAC28519.1| Strong similarity to coatamer alpha subunit (HEPCOP) homolog gb|U24105 fro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit alpha-2 2.516e-08
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain