Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19141 SustainPine v3.0 373
AutoFact: Coatomer subunit delta-1 n=8 Tax=Poaceae RepID=COPD1_ORYSJ 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Delta-COP 5.891e-09
N-terminus
sp_v3.0_unigene19241 SustainPine v3.0 452
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene19391 SustainPine v3.0 478
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 4.0e-20
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene19485 SustainPine v3.0 298
AutoFact: ADP-ribosylation factor GTPase-activating protein AGD12 n=2 Tax=Arabidopsis RepID=AGD12_ARATH 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ZAC 2.472e-11
Internal
sp_v3.0_unigene19687 SustainPine v3.0 337
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.37e-06
Internal
sp_v3.0_unigene19975 SustainPine v3.0 3459
AutoFact: pfam04871, Uso1_p115_C, Uso1 / p115 like vesicle tethering protein, C terminal region 5.0e-30
FL-Next: sp=Golgin candidate 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene20235 SustainPine v3.0 3975
AutoFact: PGAP1 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene20810 SustainPine v3.0 1746
AutoFact: Novel plant SNARE 13 [Arabidopsis thaliana] sp|Q9LRP1.1|NPS13_ARATH RecName: Full=Novel plant SNARE 13; Short=AtNPSN13 dbj|BAB02920.1| unnamed protein product [Arabidopsis thaliana] gb|AAM20473.1| unknown protein [Arabidopsis thaliana] gb|AAN65136.1| unkn 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21033 SustainPine v3.0 3815
AutoFact: sec23/sec24-like transport protein [Arabidopsis thaliana] gb|AAO22561.1| putative protein transport factor [Arabidopsis thaliana] gb|AEE82080.1| sec23/sec24-like transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_42, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene21038 SustainPine v3.0 1379
AutoFact: GTP-binding protein SAR1A n=5 Tax=Embryophyta RepID=B4FPT6_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21240 SustainPine v3.0 1551
AutoFact: GTP-binding protein SAR1A n=5 Tax=Embryophyta RepID=B4FPT6_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21872 SustainPine v3.0 543
AutoFact: AP-1 complex subunit sigma-2 n=2 Tax=Dictyostelium RepID=AP1S2_DICDI 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 1.599e-08
Putative Complete
sp_v3.0_unigene22691 SustainPine v3.0 1069
AutoFact: syntaxin-related protein Nt-syr1 [Nicotiana tabacum] 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 4.658e-18
N-terminus
sp_v3.0_unigene22885 SustainPine v3.0 1117
AutoFact: Syntaxin-132 n=3 Tax=Arabidopsis RepID=SY132_ARATH 7.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin, putative 2.197e-07
C-terminus
sp_v3.0_unigene23801 SustainPine v3.0 2015
AutoFact: B-cell receptor-associated protein 31-like protein [Arabidopsis thaliana] dbj|BAB10699.1| unnamed protein product [Arabidopsis thaliana] gb|AAX55202.1| hypothetical protein At5g48660 [Arabidopsis thaliana] gb|AAZ52779.1| expressed protein [Arabidopsis tha 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: B-cell receptor-associated protein 31-like containing protein 7.328e-13
Complete
sp_v3.0_unigene25312 SustainPine v3.0 509
AutoFact: AP-1 complex subunit mu [Arabidopsis thaliana] gb|AAB71967.1| putative Clathrin Coat Assembly protein [Arabidopsis thaliana] gb|AAM20503.1| clathrin adaptor medium chain protein MU1B, putative [Arabidopsis thaliana] gb|AAN72155.1| clathrin adaptor medium 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap-1, putative 3.449e-09
C-terminus
sp_v3.0_unigene25508 SustainPine v3.0 1252
AutoFact: Mitochondrial import receptor subunit TOM7-1 n=2 Tax=Andropogoneae RepID=B6SJR3_MAIZE 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitochondrial import receptor subunit TOM7-1 5.671e-13
Complete
sp_v3.0_unigene25794 SustainPine v3.0 380
AutoFact: PREDICTED: similar to clathrin coat assembly protein [Nasonia vitripennis] 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene25967 SustainPine v3.0 610
AutoFact: Zeta-cop, subunit of COP-I complex n=2 Tax=Chlamydomonadales RepID=A8JET7_CHLRE 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit zeta-1 4.336e-15
Complete
sp_v3.0_unigene26194 SustainPine v3.0 498
AutoFact: GTP-binding nuclear protein RAN1, putative n=1 Tax=Ixodes scapularis RepID=B7QIB6_IXOSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding nuclear protein RAN 4.122e-12
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain