Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene199639 SustainPine v3.0 344
• AutoFact: PREDICTED: similar to Clathrin, heavy polypeptide (Hc) n=1 Tax=Ciona intestinalis RepID=UPI000180C219 7.0e-34
• FL-Next: sp=Clathrin heavy chain 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Clathrin heavy chain 3.93e-12
Internal
sp_v3.0_unigene199879 SustainPine v3.0 311
• AutoFact: syntaxin 5 [Sclerotinia sclerotiorum 1980] gb|EDN93468.1| syntaxin 5 [Sclerotinia sclerotiorum 1980 UF-70] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Syntaxin 32 3.279e-09
Putative C-terminus
sp_v3.0_unigene199968 SustainPine v3.0 458
• AutoFact: coatomer subunit zeta-1 [Bos taurus] sp|P35604.2|COPZ1_BOVIN RecName: Full=Coatomer subunit zeta-1; AltName: Full=Zeta-1-coat protein; Short=Zeta-1 COP gb|AAX08679.1| coatomer protein complex, subunit zeta 1 [Bos taurus] gb|AAX08742.1| coatomer protein co 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene200968 SustainPine v3.0 291
• AutoFact: AAA-type ATPase family protein n=1 Tax=Arabidopsis thaliana RepID=B3H533_ARATH 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 5.335e-08
Internal
sp_v3.0_unigene202440 SustainPine v3.0 412
• AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding nuclear protein RAN 4.236e-12
N-terminus
sp_v3.0_unigene204649 SustainPine v3.0 502
• AutoFact: 26S protease regulatory subunit 6A n=4 Tax=leotiomyceta RepID=A6SQ02_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 8.006e-14
Putative C-terminus
sp_v3.0_unigene204749 SustainPine v3.0 293
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-26
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene205523 SustainPine v3.0 449
• AutoFact: AP-4 complex subunit sigma n=7 Tax=rosids RepID=AP4S_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative clathrin assembly protein 0.0
Putative Complete
sp_v3.0_unigene205766 SustainPine v3.0 729
• AutoFact: golgi SNAP receptor complex member 2 [Arabidopsis thaliana] sp|Q9SJL6.1|MEM11_ARATH RecName: Full=Membrin-11; Short=AtMEMB11; AltName: Full=27 kDa Golgi SNARE protein; AltName: Full=Golgi SNAP receptor complex member 2-1 gb|AAD31575.1| putative cis-Golgi 3.0e-06
• FL-Next: sp=Membrin-11; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Qb-SNARE, MEMB1-family 7.797e-06
Putative N-terminus
sp_v3.0_unigene205861 SustainPine v3.0 726
• AutoFact: AP-4 complex subunit sigma n=7 Tax=rosids RepID=AP4S_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene207752 SustainPine v3.0 617
• AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 3.843e-14
C-terminus
sp_v3.0_unigene208522 SustainPine v3.0 881
• AutoFact: Clathrin light chain protein [Arabidopsis thaliana] gb|AAD20919.1| expressed protein [Arabidopsis thaliana] gb|AAL09756.1| At2g20760/F5H14.27 [Arabidopsis thaliana] gb|AAL15285.1| At2g20760/F5H14.27 [Arabidopsis thaliana] gb|ABF85787.1| At2g20760 [Arabido 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene208773 SustainPine v3.0 293
• AutoFact: GAT domain containing protein 5.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene208826 SustainPine v3.0 258
• AutoFact: AP-1 complex subunit gamma-2 [Arabidopsis thaliana] sp|Q9ZUI6.2|AP1G2_ARATH RecName: Full=AP-1 complex subunit gamma-2; AltName: Full=Adapter-related protein complex 1 subunit gamma-2; AltName: Full=Adaptor protein complex AP-1 large subunit gamma-2; AltN 4.0e-31
• FL-Next: sp=AP-1 complex subunit gamma-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative gamma-adaptin 1 1.24e-08
Internal
sp_v3.0_unigene209018 SustainPine v3.0 338
• AutoFact: Filament multi-domain protein 3.0e-05
unknown
sp_v3.0_unigene209885 SustainPine v3.0 262
• AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 2.0e-28
• FL-Next: sp=Coatomer subunit gamma; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Coatomer subunit gamma 1.374e-08
Internal
sp_v3.0_unigene210181 SustainPine v3.0 452
• AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 1.39e-12
Internal
sp_v3.0_unigene210276 SustainPine v3.0 893
• AutoFact: Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|AAX95779.1| Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|ABA91741.1| Adaptin N terminal region family protein, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Coatomer subunit beta 1.042e-12
Internal
sp_v3.0_unigene210468 SustainPine v3.0 134
• AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 3.0e-09
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain