Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene159466 SustainPine v3.0 430
AutoFact: Beta-COP-like protein [Arabidopsis thaliana] emb|CAB79867.1| Beta-COP-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.39e-12
Internal
sp_v3.0_unigene160144 SustainPine v3.0 336
AutoFact: Clathrin adapter complex medium subunit-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZBS8_PICSI 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Clathrin Coat Assembly protein 3.142e-08
Putative C-terminus
sp_v3.0_unigene160385 SustainPine v3.0 378
AutoFact: VHS and GAT domain protein [Glycine max] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene160491 SustainPine v3.0 251
AutoFact: Microtubule organization protein n=2 Tax=Populus trichocarpa RepID=B9GIF2_POPTR 8.0e-27
FL-Next: sp=Protein MOR1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Microtubule organization protein 9.277e-10
Internal
sp_v3.0_unigene161323 SustainPine v3.0 435
AutoFact: AP-2 complex subunit sigma n=30 Tax=Eukaryota RepID=AP2S_ARATH 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 2.188e-08
C-terminus
sp_v3.0_unigene162252 SustainPine v3.0 296
AutoFact: polyprotein [Glycine max] 1.0e-19
FL-Next: tr=Disease resistance protein; pekinensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.516e-19
Internal
sp_v3.0_unigene162837 SustainPine v3.0 351
AutoFact: Unassigned protein
FL-Next: sp=B3 domain-containing transcription factor VAL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene164459 SustainPine v3.0 185
AutoFact: Unassigned protein
FL-Next: sp=Golgin candidate 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene164641 SustainPine v3.0 207
AutoFact: OSIGBa0111L12.7 protein n=1 Tax=Oryza sativa RepID=Q01IZ5_ORYSA 5.0e-16
FL-Next: tr=OSIGBa0111L12.7 protein; Oryza sativa (Rice). 0.0
Sma3: Polyprotein 8.129e-07
Internal
sp_v3.0_unigene164756 SustainPine v3.0 161
AutoFact: PGAP1 domain containing protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene164988 SustainPine v3.0 177
AutoFact: RAN [Nicotiana sylvestris] gb|AAT40987.1| RAN [Nicotiana sylvestris] 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.848e-08
N-terminus
sp_v3.0_unigene165030 SustainPine v3.0 228
AutoFact: beta-adaptin-like protein A [Arabidopsis thaliana] sp|Q9LDK9.1|APBLA_ARATH RecName: Full=Beta-adaptin-like protein A; Short=At-bA-Ad; Short=At-betaA-Ad; AltName: Full=AP complex subunit beta-A; AltName: Full=Adaptor protein complex AP subunit beta-A; AltN 2.0e-12
FL-Next: sp=Beta-adaptin-like protein A; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene165062 SustainPine v3.0 340
AutoFact: AP-3 complex subunit sigma-1, putative n=1 Tax=Ricinus communis RepID=B9S6H3_RICCO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Clathrin Coat Assembly protein 2.539e-08
Internal
sp_v3.0_unigene165695 SustainPine v3.0 307
AutoFact: clathrin coat assembly protein ap17 [Coprinopsis cinerea okayama7#130] gb|EAU80909.1| clathrin coat assembly protein ap17 [Coprinopsis cinerea okayama7#130] 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative clathrin assembly protein 5.221e-11
C-terminus
sp_v3.0_unigene166312 SustainPine v3.0 333
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 5.983e-39
Internal
sp_v3.0_unigene166376 SustainPine v3.0 455
AutoFact: AP-1 complex subunit theta-1 [Aspergillus terreus NIH2624] gb|EAU31374.1| AP-1 complex subunit theta-1 [Aspergillus terreus NIH2624] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 1.24e-08
C-terminus
sp_v3.0_unigene166501 SustainPine v3.0 267
AutoFact: golgi SNAP receptor complex member 2 [Arabidopsis thaliana] sp|Q9SJL6.1|MEM11_ARATH RecName: Full=Membrin-11; Short=AtMEMB11; AltName: Full=27 kDa Golgi SNARE protein; AltName: Full=Golgi SNAP receptor complex member 2-1 gb|AAD31575.1| putative cis-Golgi 1.0e-06
FL-Next: sp=Membrin-12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Os03g0655200 protein 4.873e-06
C-terminus
sp_v3.0_unigene167172 SustainPine v3.0 128
AutoFact: Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|AAX95779.1| Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|ABA91741.1| Adaptin N terminal region family protein, expressed [Oryza sativa Japonica Group] 2.0e-13
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 8.582e-13
Internal
sp_v3.0_unigene167455 SustainPine v3.0 287
AutoFact: 26S proteasome regulatory subunit 8 n=3 Tax=Spermatophyta RepID=Q9M613_PINTA 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 1.615e-14
Internal
sp_v3.0_unigene168023 SustainPine v3.0 360
AutoFact: Putative integrase (Fragment) n=7 Tax=Cucumis melo RepID=B0B0F4_CUCME 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.604e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain