Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene155853 SustainPine v3.0 326
• AutoFact: PREDICTED: similar to clathrin-associated protein 17 n=1 Tax=Equus caballus RepID=UPI000179686C 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Clathrin coat assembly protein ap19, putative 1.764e-08
N-terminus
sp_v3.0_unigene155955 SustainPine v3.0 487
• AutoFact: Protein transport protein SEC23 n=6 Tax=Arthrodermataceae RepID=C5FTB7_ARTOC 1.0e-23
• FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_7; Blastocystis hominis. 0.0
C-terminus
sp_v3.0_unigene156090 SustainPine v3.0 382
• AutoFact: 26S protease regulatory subunit 4 n=2 Tax=Oomycetes RepID=D0NJ92_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 4.922e-14
Internal
sp_v3.0_unigene156134 SustainPine v3.0 264
• AutoFact: Proteasome 26S subunit n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C4S5_9EUKA 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 1.268e-13
Internal
sp_v3.0_unigene156468 SustainPine v3.0 433
• AutoFact: RecName: Full=26S protease regulatory subunit 7; AltName: Full=26S proteasome AAA-ATPase subunit RPT1; AltName: Full=26S proteasome subunit 7; AltName: Full=Regulatory particle triple-A ATPase subunit 1 dbj|BAA13021.1| 26S proteasome ATPase subunit [Spina 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 1.789e-13
Internal
sp_v3.0_unigene156482 SustainPine v3.0 560
• AutoFact: GTP-binding nuclear protein GSP1/Ran [Meyerozyma guilliermondii ATCC 6260] gb|EDK38181.1| GTP-binding nuclear protein GSP1/Ran [Meyerozyma guilliermondii ATCC 6260] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 6.824e-08
C-terminus
sp_v3.0_unigene156568 SustainPine v3.0 255
• AutoFact: PREDICTED: similar to GTP-binding nuclear protein RAN/TC4 n=1 Tax=Hydra magnipapillata RepID=UPI0001924B32 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding nuclear protein RAN 3.9e-12
Internal
sp_v3.0_unigene157086 SustainPine v3.0 446
• AutoFact: AP-3 complex subunit sigma [Neurospora crassa OR74A] ref|XP_003351152.1| hypothetical protein SMAC_08168 [Sordaria macrospora k-hell] gb|EAA33980.1| AP-3 complex subunit sigma [Neurospora crassa OR74A] emb|CAE75709.1| related to AP-3 complex subunit, sigm 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157584 SustainPine v3.0 437
• AutoFact: Mu1 adaptin, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5L9Y3_9ALVE 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157607 SustainPine v3.0 481
• AutoFact: Clathrin assembly complex, medium subunit n=1 Tax=Ectocarpus siliculosus RepID=D7FLA6_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Clathrin coat assembly protein ap-1, putative 4.361e-09
C-terminus
sp_v3.0_unigene157687 SustainPine v3.0 389
• AutoFact: GTP-binding nuclear protein Ran n=3 Tax=Tetrahymena RepID=RAN_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 6.433e-08
Internal
sp_v3.0_unigene157758 SustainPine v3.0 367
• AutoFact: GTP-binding nuclear protein Ran n=3 Tax=Caligidae RepID=C1BUI8_9MAXI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding nuclear protein RAN 4.122e-12
Putative N-terminus
sp_v3.0_unigene157789 SustainPine v3.0 365
• AutoFact: WD40 repeat-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3BD99_POLPA 1.4013e-45
• FL-Next: sp=Coatomer subunit beta'-2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Coatomer subunit beta'-2 2.835e-08
Internal
sp_v3.0_unigene158040 SustainPine v3.0 343
• AutoFact: adaptor-related protein complex 1, mu 2 subunit [Xenopus (Silurana) tropicalis] gb|AAH76939.1| adaptor-related protein complex 1, mu 1 subunit [Xenopus (Silurana) tropicalis] 7.00649e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Clathrin coat assembly protein ap-1, putative 4.891e-09
C-terminus
sp_v3.0_unigene158209 SustainPine v3.0 376
• AutoFact: GTP-binding nuclear protein Ran [Danio rerio] sp|P79735.1|RAN_DANRE RecName: Full=GTP-binding nuclear protein Ran; AltName: Full=GTPase Ran; AltName: Full=Ras-related nuclear protein gb|AAB97093.1| Ran [Danio rerio] gb|AAH58047.1| Ras-related nuclear prot 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 3.851e-08
C-terminus
sp_v3.0_unigene158291 SustainPine v3.0 422
• AutoFact: PREDICTED: Golgi SNAP receptor complex member 1-like isoform 1 [Equus caballus] 6.0e-17
• FL-Next: sp=Golgi SNAP receptor complex member 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Golgi SNARE 12 protein 9.747e-06
N-terminus
sp_v3.0_unigene158463 SustainPine v3.0 429
• AutoFact: Clathrin coat assembly protein ap19 n=5 Tax=Neoptera RepID=Q17MI6_AEDAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Clathrin coat assembly protein ap19, putative 1.816e-08
N-terminus
sp_v3.0_unigene158751 SustainPine v3.0 336
• AutoFact: PREDICTED: similar to Psmc6 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E490DB 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome AAA-ATPase subunit RPT4a 2.505e-08
C-terminus
sp_v3.0_unigene159037 SustainPine v3.0 413
• AutoFact: coatomer complex subunit [Brachypodium sylvaticum] 7.0e-37
• FL-Next: sp=Coatomer subunit beta'-1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Coatomer subunit beta'-2 2.737e-08
Internal
sp_v3.0_unigene159103 SustainPine v3.0 151
• AutoFact: Ran family small GTPase n=1 Tax=Naegleria gruberi RepID=D2V0X6_NAEGR 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 5.807e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain