Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene126265 SustainPine v3.0 896
AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Coatomer subunit gamma 1.467e-08
Complete
sp_v3.0_unigene126657 SustainPine v3.0 1364
AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127578 SustainPine v3.0 832
AutoFact: Clathrin adapter complex medium subunit-like protein (Fragment) n=2 Tax=Picea sitchensis RepID=E0ZB24_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Delta-COP 8.529e-09
C-terminus
sp_v3.0_unigene127688 SustainPine v3.0 549
AutoFact: Microtubule associated protein xmap215, putative n=1 Tax=Ricinus communis RepID=B9T7P5_RICCO 0.0
FL-Next: sp=Protein MOR1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Microtubule organization protein 1.248e-09
Internal
sp_v3.0_unigene127773 SustainPine v3.0 332
AutoFact: putative small Ras GTP-binding protein [Arabidopsis thaliana] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 4.19e-08
C-terminus
sp_v3.0_unigene127974 SustainPine v3.0 887
AutoFact: Pyruvate kinase n=2 Tax=Picea sitchensis RepID=B8LL81_PICSI 0.0
FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate kinase 0.0
N-terminus
sp_v3.0_unigene128341 SustainPine v3.0 714
AutoFact: Toc34-2 protein n=1 Tax=Elaeis guineensis RepID=B3TM35_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translocase of chloroplast 34, putative, expressed 1.306e-08
N-terminus
sp_v3.0_unigene128838 SustainPine v3.0 371
AutoFact: Vesicle transport V-snare protein vti1a, putative n=1 Tax=Ricinus communis RepID=B9SVJ2_RICCO 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle transport V-snare protein vti1a, putative 7.939e-13
C-terminus
sp_v3.0_unigene129457 SustainPine v3.0 471
AutoFact: Microtubule bundling polypeptide TMBP200 n=1 Tax=Nicotiana tabacum RepID=Q8S912_TOBAC 9.0e-34
FL-Next: sp=Protein MOR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Microtubule organization protein 5.819e-10
Internal
sp_v3.0_unigene129555 SustainPine v3.0 431
AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 2.0e-25
FL-Next: Isoform 2 of B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 0.0
Internal
sp_v3.0_unigene129622 SustainPine v3.0 228
AutoFact: AP-2 complex subunit mu-1 [Arabidopsis thaliana] ref|XP_002865173.1| clathrin adaptor complexes medium subunit family protein [Arabidopsis lyrata subsp. lyrata] gb|AAB88283.1| AP47/50p [Arabidopsis thaliana] dbj|BAB08907.1| AP47/50p [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene129923 SustainPine v3.0 616
AutoFact: v-SNARE AtVTI1b [Arabidopsis thaliana] 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle transport V-snare protein vti1a, putative 1.302e-13
N-terminus
sp_v3.0_unigene129955 SustainPine v3.0 357
AutoFact: PREDICTED: similar to NFU4 (NFU domain protein 4) n=1 Tax=Vitis vinifera RepID=UPI00019858D3 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin-71 1.649e-08
Putative C-terminus
sp_v3.0_unigene130071 SustainPine v3.0 564
AutoFact: Syntaxin-71 n=1 Tax=Annona cherimola RepID=C0L7E7_ANNCH 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin-71 4.49e-09
Putative N-terminus
sp_v3.0_unigene130637 SustainPine v3.0 379
AutoFact: Vacuolar protein sorting-associated, putative n=1 Tax=Ricinus communis RepID=B9SJI7_RICCO 7.0e-13
FL-Next: sp=Vacuolar protein sorting-associated protein 45 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene130687 SustainPine v3.0 368
AutoFact: Syntaxin-72, putative n=1 Tax=Ricinus communis RepID=B9SK57_RICCO 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin-71 4.556e-09
C-terminus
sp_v3.0_unigene131047 SustainPine v3.0 456
AutoFact: AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_849785.1| AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_001031156.1| AP-3 complex subunit delta [Arabidopsis thaliana] sp|Q9C744.1|AP3D_ARATH RecName: Full=AP-3 complex subunit delta; Alt 2.99878e-43
FL-Next: sp=AP-3 complex subunit delta; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene131375 SustainPine v3.0 306
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene131694 SustainPine v3.0 714
AutoFact: Coatomer subunit beta-1 n=7 Tax=Poaceae RepID=COPB1_ORYSJ 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.528e-13
C-terminus
sp_v3.0_unigene133213 SustainPine v3.0 316
AutoFact: putative syntaxin 71 (SYP71) [Oryza sativa Japonica Group] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin-71 4.755e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain