Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene67084 SustainPine v3.0 238
AutoFact: Protein transport protein Sec24-like CEF n=4 Tax=Arabidopsis RepID=SC24C_ARATH 3.0e-11
FL-Next: sp=Protein transport protein Sec24-like CEF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene67236 SustainPine v3.0 226
AutoFact: pfam04871, Uso1_p115_C, Uso1 / p115 like vesicle tethering protein, C terminal region 2.0e-11
FL-Next: sp=Golgin candidate 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene67271 SustainPine v3.0 296
AutoFact: Probable ubiquitin-conjugating enzyme E2 23 n=2 Tax=Arabidopsis RepID=UBC23_ARATH 8.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-conjugating enzyme-like 2.242e-15
Internal
sp_v3.0_unigene67442 SustainPine v3.0 167
AutoFact: Unassigned protein
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 4.107e-09
Internal
sp_v3.0_unigene68033 SustainPine v3.0 217
AutoFact: Salt-inducible protein (Fragment) n=3 Tax=Papilionoideae RepID=O04137_MEDSA 2.0e-12
FL-Next: sp=AP-1 complex subunit sigma-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Clathrin coat assembly protein ap19, putative 3.223e-09
C-terminus
sp_v3.0_unigene68798 SustainPine v3.0 184
AutoFact: Putative clathrin-associated adaptor protein [Arabidopsis thaliana] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene69735 SustainPine v3.0 180
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Syntaxin, putative 4.541e-08
Putative C-terminus
sp_v3.0_unigene69775 SustainPine v3.0 199
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 3.0e-26
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
Internal
sp_v3.0_unigene70896 SustainPine v3.0 389
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 2.0e-06
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.773e-09
C-terminus
sp_v3.0_unigene72281 SustainPine v3.0 241
AutoFact: AP-4 complex subunit sigma n=7 Tax=rosids RepID=AP4S_ARATH 2.0e-07
FL-Next: sp=AP-4 complex subunit sigma; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene72282 SustainPine v3.0 166
AutoFact: Vesicle transport V-snare protein vti1a, putative n=1 Tax=Ricinus communis RepID=B9SVJ2_RICCO 9.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle transport V-snare protein vti1a, putative 7.691e-13
Putative C-terminus
sp_v3.0_unigene72581 SustainPine v3.0 237
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 1.0e-29
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.31e-13
Putative C-terminus
sp_v3.0_unigene73000 SustainPine v3.0 172
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 4.0e-17
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 5.105e-13
Putative C-terminus
sp_v3.0_unigene73649 SustainPine v3.0 304
AutoFact: AP3-complex subunit beta-A n=3 Tax=Arabidopsis RepID=AP3BA_ARATH 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73757 SustainPine v3.0 461
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
N-terminus
sp_v3.0_unigene74274 SustainPine v3.0 271
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene74320 SustainPine v3.0 330
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb03g000750; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene74722 SustainPine v3.0 293
AutoFact: GTP-binding protein n=1 Tax=Chlorella variabilis RepID=E1ZJ35_9CHLO 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.807e-08
Internal
sp_v3.0_unigene75002 SustainPine v3.0 87
AutoFact: transport protein sec24-like CEF [Arabidopsis thaliana] gb|AEE77894.1| transport protein sec24-like CEF [Arabidopsis thaliana] 3.0e-06
FL-Next: sp=Protein transport protein Sec24-like CEF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75025 SustainPine v3.0 408
AutoFact: Clathrin assembly protein AP47 n=3 Tax=Agaricales RepID=D6RN48_COPC7 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Clathrin coat assembly protein ap-1, putative 4.891e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain