Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: binding

Term: GO:0005488  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene183117 SustainPine v3.0 950
• AutoFact: Phosphorylase-like protein protein [Arabidopsis thaliana] gb|AEE85565.1| Phosphorylase-like protein protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183128 SustainPine v3.0 525
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene183144 SustainPine v3.0 451
• AutoFact: Short-chain type dehydrogenase/reductase n=1 Tax=Picea abies RepID=SDR1_PICAB 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Short-chain type dehydrogenase, putative 1.702e-12
N-terminus
sp_v3.0_unigene183149 SustainPine v3.0 709
• AutoFact: Adenosylhomocysteinase n=1 Tax=Phytophthora infestans T30-4 RepID=D0NEK2_PHYIT 0.0
• FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenosylhomocysteinase 0.0
C-terminus
sp_v3.0_unigene183155 SustainPine v3.0 544
• AutoFact: 26S proteasome regulatory subunit N1 [Arabidopsis thaliana] sp|Q9SIV2.2|RPN1A_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1A; AltName: Full=26S proteasome regulatory subunit RPN1 A; Short=AtRPN1a; AltName: Full=26S proteasome regula 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.968e-12
Internal
sp_v3.0_unigene183247 SustainPine v3.0 607
• AutoFact: Peptidyl-prolyl cis-trans isomerase-like 3 n=2 Tax=Dictyostelium RepID=PPIL3_DICDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene183350 SustainPine v3.0 491
• AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene183571 SustainPine v3.0 404
• AutoFact: U-box domain-containing protein 13 [Arabidopsis thaliana] sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box domain-containing protein 13; AltName: Full=Plant U-box protein 13 emb|CAB62321.1| arm repeat containing protein homolog [Arabidopsis thaliana] gb|AAK687 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene183617 SustainPine v3.0 626
• AutoFact: NADPH:protochlorophyllide oxidoreductase porA (Fragment) n=1 Tax=Pinus strobus RepID=O22599_PINST 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NADPH-protochlorophyllide oxidoreductase 2.013e-23
C-terminus
sp_v3.0_unigene183630 SustainPine v3.0 325
• AutoFact: Peptidylprolyl isomerase, putative n=2 Tax=Ricinus communis RepID=B9T7Z2_RICCO 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene183693 SustainPine v3.0 682
• AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB08749.1| carbonyl reductase-like protein [Arabidopsis thaliana] gb|AAV74232.1| At5g51030 [Arabidopsis thaliana] gb|AAW39010.1| At5g51030 [Arabidopsis thaliana] gb|AED9602 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene183704 SustainPine v3.0 312
• AutoFact: Folate transporter n=4 Tax=Brassicaceae RepID=Q4A3R4_ARATH 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene183814 SustainPine v3.0 553
• AutoFact: Unassigned protein
• FL-Next: Isoform 2 of U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44 0.0
Putative C-terminus
sp_v3.0_unigene183976 SustainPine v3.0 582
• AutoFact: Unassigned protein
• FL-Next: sp=VHS domain-containing protein At3g16270; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene184119 SustainPine v3.0 503
• AutoFact: manganese tracking factor for mitochondrial SOD2 [Arabidopsis thaliana] gb|AAL16202.1|AF428433_1 AT4g27940/T13J8_50 [Arabidopsis thaliana] gb|AAM62590.1| unknown [Arabidopsis thaliana] gb|AAM78059.1| AT4g27940/T13J8_50 [Arabidopsis thaliana] gb|AEE85411.1 1.0e-07
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Mitochondrial carrier protein CGI-69 3.392e-09
C-terminus
sp_v3.0_unigene184121 SustainPine v3.0 501
• AutoFact: rgd1, SGS3, lbl1; ragged seedling1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.953e-09
Internal
sp_v3.0_unigene184189 SustainPine v3.0 561
• AutoFact: pre-mRNA splicing factor, putative 7.0e-38
• FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Internal
sp_v3.0_unigene184249 SustainPine v3.0 301
• AutoFact: cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] sp|Q8L5Y6.1|CAND1_ARATH RecName: Full=Cullin-associated NEDD8-dissociated protein 1; AltName: Full=Cullin-associated and neddylation-dissociated protein 1; Short=AtCAND1; AltName: Full=P 1.0e-35
• FL-Next: Isoform 2 of Cullin-associated NEDD8-dissociated protein 1 OS=Arabidopsis thaliana GN=CAND1 0.0
Internal
sp_v3.0_unigene184256 SustainPine v3.0 509
• AutoFact: pfam00106, adh_short, short chain dehydrogenase 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene184518 SustainPine v3.0 696
• AutoFact: Peptidylprolyl isomerase n=1 Tax=Odoribacter splanchnicus DSM 20712 RepID=UPI0001FC339E 4.0e-39
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 5.799e-17
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain