Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: binding

Term: GO:0005488  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4783 SustainPine v3.0 566
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene4805 SustainPine v3.0 984
AutoFact: Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gb|AAD39300.1|AC007576_23 Similar to mitochondrial carrier proteins [Arabidopsis thaliana] gb|AAM61005.1| putative mitochondrial uncoupling protein [Arabidopsis thaliana] gb|ABG48467.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene4839 SustainPine v3.0 727
AutoFact: APO protein 4 [Arabidopsis thaliana] sp|Q9LSZ0.2|APO4_ARATH RecName: Full=APO protein 4, mitochondrial; Flags: Precursor dbj|BAC42155.1| unknown protein [Arabidopsis thaliana] gb|ABF85786.1| At3g21740 [Arabidopsis thaliana] gb|AEE76547.1| APO protein 4 [A 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene4882 SustainPine v3.0 527
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9SKV5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamoyl-CoA reductase, putative 1.49e-17
Internal
sp_v3.0_unigene4887 SustainPine v3.0 639
AutoFact: putative fatty acyl coA reductase [Oryza sativa Japonica Group] dbj|BAD31294.1| putative fatty acyl coA reductase [Oryza sativa Japonica Group] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene4919 SustainPine v3.0 785
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4KEY9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene4926 SustainPine v3.0 251
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 3.217e-11
C-terminus
sp_v3.0_unigene4935 SustainPine v3.0 1334
AutoFact: TRAPPC10 domain containing protein 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Putative Complete
sp_v3.0_unigene4946 SustainPine v3.0 278
AutoFact: Short chain alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9T6C0_RICCO 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Short chain alcohol dehydrogenase, putative 4.716e-36
Putative N-terminus
sp_v3.0_unigene4960 SustainPine v3.0 874
AutoFact: Arm multi-domain protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene5016 SustainPine v3.0 3593
AutoFact: putative translational activator [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene5031 SustainPine v3.0 434
AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] emb|CAB63154.1| short-chain alcohol dehydrogenase-like protein [Arabidopsis thaliana] gb|AEE78826.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Short chain alcohol dehydrogenase, putative 5.484e-14
C-terminus
sp_v3.0_unigene5225 SustainPine v3.0 2183
AutoFact: putative peroxisomal membrane carrier protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxisomal membrane protein pmp34, putative 7.909e-08
Complete
sp_v3.0_unigene5231 SustainPine v3.0 3691
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Cyclin-like protein 8.558e-09
Complete
sp_v3.0_unigene5291 SustainPine v3.0 2173
AutoFact: mitochondrial carrier protein-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative mitochondrial carrier protein 2.504e-14
Complete
sp_v3.0_unigene5301 SustainPine v3.0 3803
AutoFact: Golgi transport complex-related protein [Arabidopsis thaliana] gb|AAG52007.1|AC012563_17 putative golgi transport complex protein; 67058-70172 [Arabidopsis thaliana] gb|AEE34723.1| Golgi transport complex-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 8.691e-08
Complete
sp_v3.0_unigene5303 SustainPine v3.0 2938
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5324 SustainPine v3.0 2137
AutoFact: RecName: Full=Importin subunit alpha; AltName: Full=Karyopherin subunit alpha; Short=KAP alpha gb|AAC23722.1| importin alpha [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin alpha, putative 8.841e-18
Complete
sp_v3.0_unigene5337 SustainPine v3.0 2154
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] emb|CAC01878.1| putative protein [Arabidopsis thaliana] gb|AAM13237.1| putative protein [Arabidopsis thaliana] gb|AAM67181.1| unknown [Arabidopsis thaliana] gb|AAN65128.1| putati 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Clasp, putative 1.577e-09
Complete
sp_v3.0_unigene5348 SustainPine v3.0 3019
AutoFact: Importin-7, putative n=3 Tax=rosids RepID=B9SP38_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr5 scaffold_67, whole genome shotgun sequence 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain