Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5447 SustainPine v3.0 5148
AutoFact: putative eukaryotic translation initiation factor 4G [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5563 SustainPine v3.0 2368
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pumilio-family RNA binding repeat containing protein, expressed 1.442e-11
C-terminus
sp_v3.0_unigene5576 SustainPine v3.0 2121
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g60770; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.217e-08
Complete
sp_v3.0_unigene5672 SustainPine v3.0 1379
AutoFact: 50S ribosomal protein L7/L12, putative n=1 Tax=Ricinus communis RepID=B9RB19_RICCO 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L7/L12, putative 4.351e-12
Complete
sp_v3.0_unigene5756 SustainPine v3.0 2592
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: FAS2 3.801e-09
Complete
sp_v3.0_unigene5764 SustainPine v3.0 1597
AutoFact: APO protein 2 [Arabidopsis thaliana] gb|AED96973.1| APO protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: APO protein 3, mitochondrial, putative 3.983e-09
C-terminus
sp_v3.0_unigene5780 SustainPine v3.0 2249
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor protein kinase-like 1.032e-13
Complete
sp_v3.0_unigene5811 SustainPine v3.0 1766
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5856 SustainPine v3.0 2450
AutoFact: cell cycle control crn (crooked neck) protein-like [Arabidopsis thaliana] 0.0
FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene5928 SustainPine v3.0 3833
AutoFact: BTB domain containing protein 2.0e-06
FL-Next: sp=ETO1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ethylene-overproduction protein 1 1.855e-08
Complete
sp_v3.0_unigene6032 SustainPine v3.0 1374
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Eukaryotic translation initiation factor 3 subunit, putative 1.934e-10
Internal
sp_v3.0_unigene6043 SustainPine v3.0 3030
AutoFact: Chaperone binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTA1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6224 SustainPine v3.0 1712
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene6241 SustainPine v3.0 1882
AutoFact: Integral membrane single C2 domain protein n=2 Tax=Populus trichocarpa RepID=B9HY18_POPTR 0.0
FL-Next: tr=Integral membrane single C2 domain protein; subsp. trichocarpa). 0.0
Sma3: Integral membrane single C2 domain protein 2.544e-08
Putative C-terminus
sp_v3.0_unigene6306 SustainPine v3.0 4903
AutoFact: Niemann-Pick C1 protein [Arabidopsis thaliana] gb|AEE31919.1| Niemann-Pick C1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cholesterol transport protein 3.622e-09
Complete
sp_v3.0_unigene6315 SustainPine v3.0 2596
AutoFact: Heat shock protein DnaJ with tetratricopeptide repeat [Arabidopsis thaliana] gb|AED91808.1| Heat shock protein DnaJ with tetratricopeptide repeat [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g41520 2.864e-08
Putative Complete
sp_v3.0_unigene6487 SustainPine v3.0 4884
AutoFact: trafficking protein particle complex subunit 10 [Dictyostelium discoideum AX4] ref|XP_644774.1| trafficking protein particle complex subunit 10 [Dictyostelium discoideum AX4] sp|Q556Z3.1|TPC10_DICDI RecName: Full=Trafficking protein particle complex subun 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene6520 SustainPine v3.0 852
AutoFact: anaphase promoting complex/cyclosome subunit [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene6547 SustainPine v3.0 2061
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AEE27660.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene6570 SustainPine v3.0 3350
AutoFact: FERONIA receptor-like kinase [Cardamine flexuosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FERONIA receptor-like kinase 6.019e-18
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain