Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene27029 SustainPine v3.0 1102
• AutoFact: Polyubiquitin n=2 Tax=Chlorophyta RepID=D8U995_VOLCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene27079 SustainPine v3.0 983
• AutoFact: Ubiquitin extension protein n=1 Tax=Capsicum annuum RepID=A0MKC8_CAPAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene27263 SustainPine v3.0 1280
• AutoFact: Actin-1 n=1 Tax=Glycine max RepID=ACT1_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin 8.462e-27
Complete
sp_v3.0_unigene27394 SustainPine v3.0 514
• AutoFact: Ubiquitin/ribosomal protein S27 fusion protein n=2 Tax=Coelomata RepID=Q0ZD85_PECGU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene27713 SustainPine v3.0 717
• AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Uv excision repair protein rad23, putative 1.217e-11
N-terminus
sp_v3.0_unigene28647 SustainPine v3.0 972
• AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 6.02558e-44
• FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
C-terminus
sp_v3.0_unigene28696 SustainPine v3.0 710
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene29394 SustainPine v3.0 1584
• AutoFact: ubiquitin precursor [Hevea brasiliensis] 9.0e-17
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Polyubiquitin 9.035e-07
Complete
sp_v3.0_unigene29443 SustainPine v3.0 1064
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin fusion protein 0.0
Complete
sp_v3.0_unigene29696 SustainPine v3.0 755
• AutoFact: polyubiquitin [Plantago major] 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Bi-ubiquitin 1.738e-08
Complete
sp_v3.0_unigene29895 SustainPine v3.0 536
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 3.0e-36
• FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene29985 SustainPine v3.0 2518
• AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor GBOF-1 6.026e-10
Complete
sp_v3.0_unigene30116 SustainPine v3.0 1284
• AutoFact: ubiquitin family protein [Arabidopsis thaliana] ref|NP_851205.1| ubiquitin family protein [Arabidopsis thaliana] ref|NP_851206.1| ubiquitin family protein [Arabidopsis thaliana] gb|AAM67158.1| ubiquitin-like protein [Arabidopsis thaliana] gb|AAO42822.1| A 3.0e-28
• FL-Next: tr=Ubiquitin family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: Ubiquitin-like protein 5.282e-11
Complete
sp_v3.0_unigene30466 SustainPine v3.0 1234
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30548 SustainPine v3.0 1169
• AutoFact: Polyubiquitin n=2 Tax=Chlorophyta RepID=D8U995_VOLCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30834 SustainPine v3.0 577
• AutoFact: Ubiquitin-40S ribosomal protein S27a n=60 Tax=Eumetazoa RepID=RS27A_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S27a 2.021e-06
Complete
sp_v3.0_unigene31303 SustainPine v3.0 456
• AutoFact: Ubiquitin n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SFI2_PARBP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin extension protein 1/2 0.0
Complete
sp_v3.0_unigene31515 SustainPine v3.0 253
• AutoFact: Chain A, Structure Of Ubiquitin Solved By Sad Using The Lanthanide- Binding Tag 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene31533 SustainPine v3.0 449
• AutoFact: Ubiquitin n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GNZ3_PARBA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin 5.744e-07
Putative Complete
sp_v3.0_unigene31581 SustainPine v3.0 127
• AutoFact: Polyubiquitin (Fragment) n=1 Tax=Lemna minor RepID=Q6B444_LEMMI 2.0e-08
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain