|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene1663
|
SustainPine v3.0
|
621
|
|
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S033_RICCO
|
3.0e-37
|
|
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 50; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: DEAD-box ATP-dependent RNA helicase 50
|
3.983e-09
|
|
C-terminus
|
|
sp_v3.0_unigene1664
|
SustainPine v3.0
|
1254
|
|
• AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Putative uncharacterized protein
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene1665
|
SustainPine v3.0
|
1273
|
|
• AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
1.426e-09
|
|
C-terminus
|
|
sp_v3.0_unigene1686
|
SustainPine v3.0
|
2984
|
|
• AutoFact: carbon catabolite repressor protein 4-like 1 [Arabidopsis thaliana] sp|Q8W0Z9.1|CCR4A_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 1; Short=CCR4 homolog 1 gb|AAL58932.1|AF462845_1 AT3g58560/F14P22_150 [Arabidopsis thaliana] gb|AAM9136
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene1706
|
SustainPine v3.0
|
696
|
|
• AutoFact: RNA methyltransferase family protein [Arabidopsis thaliana] dbj|BAB01724.1| RNA methyltransferase-like protein [Arabidopsis thaliana] gb|AEE76490.1| RNA methyltransferase family protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene1741
|
SustainPine v3.0
|
2868
|
|
• AutoFact: cyclophilin 59 [Arabidopsis thaliana] gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene1742
|
SustainPine v3.0
|
1219
|
|
• AutoFact: Translation initiation factor n=4 Tax=Magnoliophyta RepID=B5M1Y2_RHEAU
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Putative uncharacterized protein
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene1756
|
SustainPine v3.0
|
1404
|
|
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAK44097.1|AF370282_1 putative rev interacting protein mis3 [Arabidopsis thaliana] emb|CAC08342.1| rev interacting protein mis3-like [Arabidopsis thaliana] gb|AAN13132.1| putative rev inte
|
0.0
|
|
• FL-Next: sp=KRR1 small subunit processome component; Vitis vinifera (Grape).
|
0.0
|
|
N-terminus
|
|
sp_v3.0_unigene1782
|
SustainPine v3.0
|
1999
|
|
• AutoFact: S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb|AEE33079.1| S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene1796
|
SustainPine v3.0
|
1187
|
|
• AutoFact: U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
|
5.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: U1 small nuclear ribonucleoprotein
|
5.633e-12
|
|
Complete
|
|
sp_v3.0_unigene1809
|
SustainPine v3.0
|
1238
|
|
• AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal
|
2.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Putative N6-adenosine-methyltransferase MT-A70-like
|
7.31e-06
|
|
N-terminus
|
|
sp_v3.0_unigene1813
|
SustainPine v3.0
|
1601
|
|
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; AltName: Full=Maize PPR4 homolog; Short=AtPPR4; Flags: Precursor dbj|BAF01
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene1815
|
SustainPine v3.0
|
377
|
|
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO
|
0.0
|
|
• FL-Next: sp=Putative pumilio homolog 8, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Pumilio-family RNA binding repeat containing protein, expressed
|
1.305e-11
|
|
Internal
|
|
sp_v3.0_unigene1868
|
SustainPine v3.0
|
2576
|
|
• AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Sma3: U1 snRNP
|
3.506e-09
|
|
Complete
|
|
sp_v3.0_unigene1869
|
SustainPine v3.0
|
2047
|
|
• AutoFact: putative U1 snRNP 70K protein [Trifolium pratense]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: U1 snRNP
|
9.17e-09
|
|
Putative Complete
|
|
sp_v3.0_unigene1875
|
SustainPine v3.0
|
5252
|
|
• AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA
|
0.0
|
|
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Chromatin remodeling complex subunit
|
1.086e-16
|
|
Complete
|
|
sp_v3.0_unigene1891
|
SustainPine v3.0
|
2694
|
|
• AutoFact: [O] COG0464 ATPases of the AAA+ class
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: AAA-type ATPase family protein, putative, expressed
|
1.969e-07
|
|
Complete
|
|
sp_v3.0_unigene1892
|
SustainPine v3.0
|
2855
|
|
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Chromosome undetermined scaffold_91, whole genome shotgun sequence
|
1.949e-08
|
|
Complete
|
|
sp_v3.0_unigene1914
|
SustainPine v3.0
|
2363
|
|
• AutoFact: Ribonuclease II/R family protein [Arabidopsis thaliana] gb|AAQ62877.1| At5g02250 [Arabidopsis thaliana] dbj|BAD44146.1| ribonuclease II-like protein [Arabidopsis thaliana] gb|AED90450.1| Ribonuclease II/R family protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Sma3: Ribonuclease II-like protein
|
1.746e-09
|
|
C-terminus
|
|
sp_v3.0_unigene2004
|
SustainPine v3.0
|
1977
|
|
• AutoFact: KDEL motif-containing protein 1, putative n=1 Tax=Ricinus communis RepID=B9R9B3_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: KDEL motif-containing protein 1, putative
|
5.542e-20
|
|
Complete
|
