Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small ribosomal subunit

Term: GO:0015935  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene68583 SustainPine v3.0 311
• AutoFact: Putative 40S ribosomal protein n=1 Tax=Zea mays RepID=Q8H6J0_MAIZE 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 2.507e-07
C-terminus
sp_v3.0_unigene69225 SustainPine v3.0 246
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70067 SustainPine v3.0 329
• AutoFact: putative 40S ribosomal protein S2 [Oryza sativa Japonica Group] 2.0e-29
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 3.791e-15
C-terminus
sp_v3.0_unigene70783 SustainPine v3.0 358
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 3.244e-15
N-terminus
sp_v3.0_unigene73490 SustainPine v3.0 434
• AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Putative Complete
sp_v3.0_unigene74410 SustainPine v3.0 368
• AutoFact: 40S ribosomal protein rpS3e n=2 Tax=Tetrahymena thermophila RepID=E6PBS1_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene74656 SustainPine v3.0 240
• AutoFact: RecName: Full=40S ribosomal protein S5 emb|CAA06491.1| 40S ribosomal protein S5 [Cicer arietinum] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 3.497e-21
Internal
sp_v3.0_unigene74736 SustainPine v3.0 239
• AutoFact: RecName: Full=40S ribosomal protein S5 emb|CAA06491.1| 40S ribosomal protein S5 [Cicer arietinum] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 3.497e-21
Internal
sp_v3.0_unigene74857 SustainPine v3.0 219
• AutoFact: S15 ribosomal protein n=1 Tax=Dunaliella tertiolecta RepID=Q8L4R2_DUNTE 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 3.725e-20
N-terminus
sp_v3.0_unigene74929 SustainPine v3.0 360
• AutoFact: Ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit n=3 Tax=Chlamydomonadales RepID=A8JGF8_CHLRE 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 9.80909e-45
C-terminus
sp_v3.0_unigene74937 SustainPine v3.0 321
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 0.0
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.544e-19
Internal
sp_v3.0_unigene75080 SustainPine v3.0 130
• AutoFact: Putative ribosomal protein S3 n=1 Tax=Mayetiola destructor RepID=D1MLN7_MAYDE 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3, putative 1.882e-08
Putative N-terminus
sp_v3.0_unigene75562 SustainPine v3.0 272
• AutoFact: 40S ribosomal protein S5, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LFJ0_9ALVE 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 6.618e-22
C-terminus
sp_v3.0_unigene75825 SustainPine v3.0 276
• AutoFact: 40S ribosomal protein SA n=3 Tax=Zea mays RepID=B6TIC4_MAIZE 5.0e-06
• FL-Next: sp=40S ribosomal protein SA; Daucus carota (Carrot). 0.0
Putative N-terminus
sp_v3.0_unigene75976 SustainPine v3.0 329
• AutoFact: 60S ribosomal protein L2 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q9LLS6_TOBAC 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
C-terminus
sp_v3.0_unigene76118 SustainPine v3.0 358
• AutoFact: 40S ribosomal protein S5 n=1 Tax=Chlamydomonas sp. ICE-L RepID=Q2UVI0_9CHLO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.535e-21
Internal
sp_v3.0_unigene76975 SustainPine v3.0 233
• AutoFact: 40S ribosomal protein S5 [Lodderomyces elongisporus NRRL YB-4239] gb|EDK45908.1| 40S ribosomal protein S5 [Lodderomyces elongisporus NRRL YB-4239] 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene77003 SustainPine v3.0 93
• AutoFact: Probable 40S ribosomal protein S5 n=1 Tax=Sporisorium reilianum RepID=E6ZL00_9BASI 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.959e-14
Putative C-terminus
sp_v3.0_unigene77483 SustainPine v3.0 250
• AutoFact: PREDICTED: 40S ribosomal protein S20 [Apis mellifera] 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 9.96e-15
N-terminus
sp_v3.0_unigene77531 SustainPine v3.0 309
• AutoFact: ribosomal protein S2 [Coprinopsis cinerea okayama7#130] gb|EAU91621.1| ribosomal protein S2 [Coprinopsis cinerea okayama7#130] 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 3.365e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain