Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small ribosomal subunit

Term: GO:0015935  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene51401 SustainPine v3.0 535
• AutoFact: ribosomal protein S15 [Pisum sativum] 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 1.325e-13
C-terminus
sp_v3.0_unigene52071 SustainPine v3.0 372
• AutoFact: 40S ribosomal protein S15 n=4 Tax=Spermatophyta RepID=RS15_ELAOL 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 3.542e-17
N-terminus
sp_v3.0_unigene53458 SustainPine v3.0 435
• AutoFact: receptor protein kinase [Pinus sylvestris] 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flagellin-sensing 2-like protein 1.4013e-45
Internal
sp_v3.0_unigene53898 SustainPine v3.0 270
• AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 4.343e-07
Putative N-terminus
sp_v3.0_unigene55626 SustainPine v3.0 236
• AutoFact: 40s ribosomal protein s5-1 [Cryptococcus neoformans var. neoformans JEC21] ref|XP_772651.1| hypothetical protein CNBK0250 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL18004.1| hypothetical protein CNBK0250 [Cryptococcus neoformans var. neoforma 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 5.475e-14
Putative N-terminus
sp_v3.0_unigene56135 SustainPine v3.0 261
• AutoFact: putative 40S ribosomal protein S9 [Artemisia annua] 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.064e-34
Putative C-terminus
sp_v3.0_unigene56852 SustainPine v3.0 121
• AutoFact: 30S ribosomal protein S3, chloroplastic n=41 Tax=Pinaceae RepID=RR3_PICAB 1.0e-09
• FL-Next: sp=30S ribosomal protein S3, chloroplastic; Pinus arizonica. Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S3, chloroplastic 0.0
C-terminus
sp_v3.0_unigene56896 SustainPine v3.0 475
• AutoFact: 40S ribosomal protein S20 n=2 Tax=Coccidioides posadasii RepID=E9D7P9_COCPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Putative Complete
sp_v3.0_unigene56998 SustainPine v3.0 399
• AutoFact: Unassigned protein 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene57278 SustainPine v3.0 341
• AutoFact: 40S ribosomal protein S5 n=15 Tax=leotiomyceta RepID=A6QYH3_AJECN 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 5.584e-25
N-terminus
sp_v3.0_unigene57837 SustainPine v3.0 449
• AutoFact: 40S ribosomal protein S20-2 [Arabidopsis thaliana] ref|NP_850665.1| 40S ribosomal protein S20-2 [Arabidopsis thaliana] ref|NP_001030826.1| 40S ribosomal protein S20-2 [Arabidopsis thaliana] sp|Q9STY6.1|RS202_ARATH RecName: Full=40S ribosomal protein S20-2 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Putative Complete
sp_v3.0_unigene58160 SustainPine v3.0 319
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 2.61e-19
Internal
sp_v3.0_unigene58338 SustainPine v3.0 443
• AutoFact: Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gb|ABO95159.1| Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.591e-18
Putative Complete
sp_v3.0_unigene59018 SustainPine v3.0 204
• AutoFact: 40S ribosomal protein n=4 Tax=Oryza sativa RepID=Q10QU9_ORYSJ 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.019e-28
Internal
sp_v3.0_unigene59047 SustainPine v3.0 140
• AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3, putative 1.882e-08
N-terminus
sp_v3.0_unigene61571 SustainPine v3.0 152
• AutoFact: Ribosomal protein S19 (Fragment) n=3 Tax=Pinaceae RepID=D2DWH9_9CONI 2.0e-20
• FL-Next: sp=30S ribosomal protein S19, chloroplastic 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
• Sma3: Ribosomal protein S19 4.05956e-42
Internal
sp_v3.0_unigene62377 SustainPine v3.0 205
• AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 7.117e-11
Internal
sp_v3.0_unigene65558 SustainPine v3.0 301
• AutoFact: ribosomal protein L2-like [Solanum tuberosum] 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L2 1.467e-07
Internal
sp_v3.0_unigene65950 SustainPine v3.0 117
• AutoFact: 40S ribosomal protein S9 [Catharanthus roseus] 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 4.911e-20
Internal
sp_v3.0_unigene68178 SustainPine v3.0 231
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 6.616e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain