Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small ribosomal subunit

Term: GO:0015935  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene33152 SustainPine v3.0 614
AutoFact: PREDICTED: similar to ribosomal protein S9 isoform 1 n=1 Tax=Ciona intestinalis RepID=UPI000180D308 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S9 2.24208e-44
Complete
sp_v3.0_unigene33223 SustainPine v3.0 763
AutoFact: ribosomal protein S3 [Ostrinia nubilalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.138e-10
Complete
sp_v3.0_unigene33366 SustainPine v3.0 608
AutoFact: 40S ribosomal protein S23 n=1 Tax=Trichinella spiralis RepID=E5S4A3_TRISP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 1.691e-10
Complete
sp_v3.0_unigene33382 SustainPine v3.0 613
AutoFact: PREDICTED: similar to ribosomal protein S9 isoform 1 n=1 Tax=Ciona intestinalis RepID=UPI000180D308 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S9 1.4013e-44
Complete
sp_v3.0_unigene33483 SustainPine v3.0 503
AutoFact: 40S ribosomal protein S15 n=1 Tax=Zea mays RepID=B6U476_MAIZE 0.0
FL-Next: tr=40S ribosomal protein S15; Zea mays (Maize). 0.0
Sma3: 40S ribosomal protein S15 6.3e-17
Complete
sp_v3.0_unigene34418 SustainPine v3.0 710
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S2 1.932e-19
N-terminus
sp_v3.0_unigene34615 SustainPine v3.0 296
AutoFact: NADH-ubiquinone oxidoreductase chain 3 (Fragment) n=1 Tax=Araucaria heterophylla RepID=Q7YF57_ARAHE 5.0e-16
FL-Next: sp=NADH-ubiquinone oxidoreductase chain 3; Pinus sylvestris (Scots pine). Mitochondrion. 0.0
Sma3: NADH-ubiquinone oxidoreductase chain 3 0.0
C-terminus
sp_v3.0_unigene34920 SustainPine v3.0 604
AutoFact: 30S ribosomal protein S7, chloroplastic n=15 Tax=Pinaceae RepID=RR7_PINKO 0.0
FL-Next: sp=30S ribosomal protein S7, chloroplastic; Pinus arizonica. Plastid; Chloroplast. 0.0
Sma3: 30S ribosomal protein S7, chloroplastic 2.297e-19
N-terminus
sp_v3.0_unigene35022 SustainPine v3.0 1629
AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene35739 SustainPine v3.0 1124
AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q5M9U0_TOBAC 0.0
FL-Next: sp=30S ribosomal protein S4, chloroplastic; verticillata). Plastid; Chloroplast. 0.0
Sma3: Ribosomal protein S4 3.55299e-41
Complete
sp_v3.0_unigene35749 SustainPine v3.0 335
AutoFact: 40S ribosomal protein S23 n=1 Tax=Trichinella spiralis RepID=E5S4A3_TRISP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 1.975e-10
Putative C-terminus
sp_v3.0_unigene35837 SustainPine v3.0 648
AutoFact: 60S ribosomal protein L8 (Fragment) n=1 Tax=Simulium nigrimanum RepID=D1FQB7_9DIPT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L8 7.652e-09
C-terminus
sp_v3.0_unigene35859 SustainPine v3.0 426
AutoFact: 40S ribosomal protein S23 n=1 Tax=Salmo salar RepID=C0H7K2_SALSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 1.975e-10
Putative Complete
sp_v3.0_unigene35861 SustainPine v3.0 429
AutoFact: Ribosomal protein S23, putative n=2 Tax=Sarcocystidae RepID=B9PHL8_TOXGO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 1.975e-10
Putative Complete
sp_v3.0_unigene35891 SustainPine v3.0 798
AutoFact: [J] COG0092 Ribosomal protein S3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene36690 SustainPine v3.0 847
AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S9 5.46506e-44
Complete
sp_v3.0_unigene45050 SustainPine v3.0 1247
AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q5M9U0_TOBAC 0.0
FL-Next: sp=30S ribosomal protein S4, chloroplastic; verticillata). Plastid; Chloroplast. 0.0
Sma3: Ribosomal protein S4 3.55299e-41
Putative Complete
sp_v3.0_unigene45140 SustainPine v3.0 515
AutoFact: Leucine-rich repeat receptor protein kinase EXS, putative n=1 Tax=Ricinus communis RepID=B9SM68_RICCO 4.00001e-40
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.308e-08
Internal
sp_v3.0_unigene46021 SustainPine v3.0 790
AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 2.0e-36
FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 40S ribosomal protein S2 2.544e-19
C-terminus
sp_v3.0_unigene51299 SustainPine v3.0 577
AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S9 2.85697e-41
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain