Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: small ribosomal subunit

Term: GO:0015935  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene204992 SustainPine v3.0 352
• AutoFact: 40S ribosomal protein S9 (Fragment) n=1 Tax=Cyanophora paradoxa RepID=Q9SCG0_CYAPA 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 4.2039e-45
C-terminus
sp_v3.0_unigene205433 SustainPine v3.0 256
• AutoFact: 60S ribosomal protein L8-3 [Arabidopsis thaliana] sp|Q42064.2|RL83_ARATH RecName: Full=60S ribosomal protein L8-3 gb|AAK32778.1|AF361610_1 AT4g36130/F23E13_20 [Arabidopsis thaliana] gb|AAK32922.1|AF367335_1 AT4g36130/F23E13_20 [Arabidopsis thaliana] emb|C 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
C-terminus
sp_v3.0_unigene205437 SustainPine v3.0 473
• AutoFact: 40S ribosomal protein S23 n=5 Tax=Chromadorea RepID=RS23_BRUMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Putative Complete
sp_v3.0_unigene205441 SustainPine v3.0 466
• AutoFact: Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gb|ABO95159.1| Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Complete
sp_v3.0_unigene205492 SustainPine v3.0 638
• AutoFact: Ribosomal protein S15 (Fragment) n=2 Tax=Mollusca RepID=Q8ITA6_AEQIR 9.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 1.297e-16
Complete
sp_v3.0_unigene205519 SustainPine v3.0 685
• AutoFact: Ribosomal protein S5, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gb|ABO96875.1| Ribosomal protein S5, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 2.11e-21
Complete
sp_v3.0_unigene205545 SustainPine v3.0 501
• AutoFact: 40S ribosomal protein S5, putative n=6 Tax=Plasmodium RepID=A5KC61_PLAVS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.535e-21
C-terminus
sp_v3.0_unigene205580 SustainPine v3.0 568
• AutoFact: 40S ribosomal protein S5 n=4 Tax=Zea mays RepID=B6SHZ1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 2.11e-21
C-terminus
sp_v3.0_unigene205581 SustainPine v3.0 456
• AutoFact: 40S ribosomal protein S9, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAJ3_9ALVE 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 9.80909e-45
C-terminus
sp_v3.0_unigene205675 SustainPine v3.0 438
• AutoFact: Putative ribosomal protein L8e (Fragment) n=1 Tax=Amblyomma variegatum RepID=F0J8L8_AMBVA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 2.558e-08
N-terminus
sp_v3.0_unigene205690 SustainPine v3.0 357
• AutoFact: [J] COG0522 Ribosomal protein S4 and related proteins 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.621e-29
N-terminus
sp_v3.0_unigene205938 SustainPine v3.0 421
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Salmo salar RepID=C0H7K2_SALSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Putative Complete
sp_v3.0_unigene206027 SustainPine v3.0 631
• AutoFact: 40S ribosomal protein S23 n=32 Tax=leotiomyceta RepID=RS23_ASPFU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Complete
sp_v3.0_unigene206243 SustainPine v3.0 418
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Salmo salar RepID=C0H7K2_SALSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Putative Complete
sp_v3.0_unigene206729 SustainPine v3.0 559
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.54143e-44
Complete
sp_v3.0_unigene206978 SustainPine v3.0 694
• AutoFact: 40S ribosomal protein S5-2 [Arabidopsis thaliana] ref|NP_850564.1| 40S ribosomal protein S5-2 [Arabidopsis thaliana] ref|XP_002884873.1| ATRPS5A [Arabidopsis lyrata subsp. lyrata] sp|P51427.2|RS52_ARATH RecName: Full=40S ribosomal protein S5-2 gb|AAF23210 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 0.0
Complete
sp_v3.0_unigene207021 SustainPine v3.0 544
• AutoFact: 40S ribosomal protein S23 n=32 Tax=leotiomyceta RepID=RS23_ASPFU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Complete
sp_v3.0_unigene207704 SustainPine v3.0 912
• AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene208296 SustainPine v3.0 221
• AutoFact: Metallothio_2 multi-domain protein 1.0e-08
• Sma3: Metallothionein-like protein type 2 9.551e-31
putative_coding
sp_v3.0_unigene208445 SustainPine v3.0 443
• AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain