Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: K Homology domain

Term: IPR004087  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75587 SustainPine v3.0 204
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Lepidogyna hodgsoniae RepID=B3U1Z4_9MARC 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene75738 SustainPine v3.0 365
• AutoFact: Unassigned protein 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene75805 SustainPine v3.0 354
• AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 4.0e-24
• FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
• Sma3: Polynucleotide phosphorylase 1.122e-08
Internal
sp_v3.0_unigene75827 SustainPine v3.0 209
• AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene76230 SustainPine v3.0 191
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Pinus nigra RepID=B3U1V3_9CONI 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene76509 SustainPine v3.0 160
• AutoFact: Unassigned protein 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76589 SustainPine v3.0 236
• AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T8Y6_RICCO 1.0e-22
• FL-Next: sp=Probable non-intrinsic ABC protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 2.24208e-44
Internal
sp_v3.0_unigene76905 SustainPine v3.0 237
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Lepidogyna hodgsoniae RepID=B3U1Z5_9MARC 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene77196 SustainPine v3.0 228
• AutoFact: Unassigned protein 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77314 SustainPine v3.0 477
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 1.36201e-40
C-terminus
sp_v3.0_unigene77465 SustainPine v3.0 382
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 2.877e-09
C-terminus
sp_v3.0_unigene77649 SustainPine v3.0 284
• AutoFact: ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130] gb|EAU88940.1| ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130] 7.0e-32
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 51; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 27 1.042e-08
Internal
sp_v3.0_unigene78249 SustainPine v3.0 169
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 5.781e-10
C-terminus
sp_v3.0_unigene78750 SustainPine v3.0 170
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-rich element binding factor 3 8.043e-12
Internal
sp_v3.0_unigene79233 SustainPine v3.0 297
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene80019 SustainPine v3.0 237
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group] 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 1.209e-09
C-terminus
sp_v3.0_unigene80317 SustainPine v3.0 205
• AutoFact: polynucleotide phosphorylase [Pisum sativum] 1.0e-12
• FL-Next: tr=Putative uncharacterized protein Sb02g003900; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: Putative polynucleotide phosphorylase 1.439e-08
Internal
sp_v3.0_unigene81353 SustainPine v3.0 111
• AutoFact: Unassigned protein 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81410 SustainPine v3.0 382
• AutoFact: 40S ribosomal protein S3, putative n=6 Tax=Trypanosoma RepID=C9ZXU6_TRYB9 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 40S ribosomal protein 2.38e-07
N-terminus
sp_v3.0_unigene81624 SustainPine v3.0 88
• AutoFact: protein RIK [Arabidopsis thaliana] sp|Q9LIA4.2|RIK_ARATH RecName: Full=Protein RIK; AltName: Full=Rough sheath 2-interacting KH domain protein; Short=RS2-interacting KH domain protein gb|AAY24687.1| KH-domain protein [Arabidopsis thaliana] gb|AEE77580.1| 3.0e-08
• FL-Next: sp=Protein RIK; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rough sheath 2-interacting KH domain protein 2.665e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain