Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11675 SustainPine v3.0 1938
AutoFact: Makorin-1, putative n=1 Tax=Ricinus communis RepID=B9SL96_RICCO 0.0
FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene11797 SustainPine v3.0 1534
AutoFact: pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 4.478e-16
Complete
sp_v3.0_unigene11934 SustainPine v3.0 1491
AutoFact: RING finger-like protein [Oryza sativa Japonica Group] dbj|BAB90773.1| RING finger-like protein [Oryza sativa Japonica Group] dbj|BAG89633.1| unnamed protein product [Oryza sativa Japonica Group] 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11949 SustainPine v3.0 1499
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12119 SustainPine v3.0 708
AutoFact: Putative zinc finger protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6L4V6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene12463 SustainPine v3.0 1139
AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene12473 SustainPine v3.0 870
AutoFact: Os08g0451800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J5A1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative ubiquitin conjugating enzyme 7 interacting protein 4 4.959e-09
C-terminus
sp_v3.0_unigene12737 SustainPine v3.0 2044
AutoFact: cellulose synthase-like protein OsCslE2 [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_296, whole genome shotgun sequence 2.873e-17
C-terminus
sp_v3.0_unigene12864 SustainPine v3.0 1832
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13169 SustainPine v3.0 1761
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene13276 SustainPine v3.0 3958
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene13584 SustainPine v3.0 831
AutoFact: Unassigned protein
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene13677 SustainPine v3.0 957
AutoFact: ATP binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T9S4_RICCO 0.0
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Kinase, putative 1.496e-06
Internal
sp_v3.0_unigene13688 SustainPine v3.0 1172
AutoFact: TED3; TED3 (REVERSAL OF THE DET PHENOTYPE 3); protein binding / zinc ion binding; K06664 peroxin-2 0.0
FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene13742 SustainPine v3.0 1819
AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
FL-Next: sp=Peroxisome biogenesis factor 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Peroxisome biogenesis factor 10 4.688e-09
Complete
sp_v3.0_unigene13797 SustainPine v3.0 1155
AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849687.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849688.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13870 SustainPine v3.0 1891
AutoFact: E3 ubiquitin protein ligase DRIP2 [Arabidopsis thaliana] sp|Q94AY3.1|DRIP2_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP2; AltName: Full=DREB2A-interacting protein 2 gb|AAK73976.1| At2g30580/T6B20.7 [Arabidopsis thaliana] gb|AAB63079.2| putative C3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ring finger protein, putative 3.638e-06
Complete
sp_v3.0_unigene13961 SustainPine v3.0 436
AutoFact: zinc finger family protein [Picea abies] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-H2 finger protein ATL2M 4.997e-12
Internal
sp_v3.0_unigene14030 SustainPine v3.0 992
AutoFact: pfam12819, Malectin_like, Carbohydrate-binding protein of the ER 3.0e-28
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene14065 SustainPine v3.0 888
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.694e-09
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain