Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1575 SustainPine v3.0 2462
AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone ubiquitination proteins group 1.374e-08
Complete
sp_v3.0_unigene1584 SustainPine v3.0 2086
AutoFact: [R] COG0666 FOG: Ankyrin repeat 3.0e-07
FL-Next: sp=Probable E3 ubiquitin-protein ligase XBOS34; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Auxin-regulated protein-like protein 3.527e-08
Complete
sp_v3.0_unigene1594 SustainPine v3.0 1585
AutoFact: Zinc transporter, putative n=1 Tax=Asparagus officinalis RepID=Q2XNV5_ASPOF 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative zinc transporter 8.968e-17
Complete
sp_v3.0_unigene1687 SustainPine v3.0 1568
AutoFact: DUF716 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plant viral-response family protein-like 2.502e-08
Complete
sp_v3.0_unigene1769 SustainPine v3.0 1496
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAW80858.1| At5g45290 [Arabidopsis thaliana] gb|AAW80870.1| At5g45290 [Arabidopsis thaliana] gb|AED95227.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ring finger protein, putative 8.133e-12
C-terminus
sp_v3.0_unigene1800 SustainPine v3.0 1028
AutoFact: RING/U-box domain-containing protein n=4 Tax=Arabidopsis RepID=F4JWA1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene1822 SustainPine v3.0 3048
AutoFact: U-box multi-domain protein 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-protein ligase, putative 1.27e-10
Complete
sp_v3.0_unigene1870 SustainPine v3.0 2573
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ring finger protein, putative 2.86e-13
Putative Complete
sp_v3.0_unigene1875 SustainPine v3.0 5252
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.086e-16
Complete
sp_v3.0_unigene1911 SustainPine v3.0 2927
AutoFact: Keratin_B2 multi-domain protein 1.0e-05
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene1940 SustainPine v3.0 1268
AutoFact: TPA_exp: E3 ubiquitin ligase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spotted leaf protein, putative 1.404e-08
C-terminus
sp_v3.0_unigene1953 SustainPine v3.0 1572
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDU7_RICCO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2015 SustainPine v3.0 1677
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2038 SustainPine v3.0 1772
AutoFact: e-cadherin binding protein-like protein [Arabidopsis thaliana] emb|CAB69844.1| putative protein [Arabidopsis thaliana] gb|ABD59082.1| At5g01160 [Arabidopsis thaliana] dbj|BAE99278.1| hypothetical protein [Arabidopsis thaliana] gb|AED90305.1| e-cadherin bi 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene2039 SustainPine v3.0 2107
AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj| 2.0e-34
FL-Next: sp=E3 ubiquitin-protein ligase PRT1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene2090 SustainPine v3.0 1521
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL38373.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAM10083.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AEC09635.1| RING/U-box domain-containing protein 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene2116 SustainPine v3.0 1520
AutoFact: DUF248 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin-like protein 1.256e-18
C-terminus
sp_v3.0_unigene2119 SustainPine v3.0 1268
AutoFact: protein phosphatase 2c-like protein [Eutrema halophilum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 2.547e-15
C-terminus
sp_v3.0_unigene2121 SustainPine v3.0 1924
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_973461.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11603.1|AF424609_1 unknown protein [Arabidopsis thaliana] gb|AAM15000.1| Expressed protein [Arabidopsis thaliana 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2122 SustainPine v3.0 879
AutoFact: Unassigned protein 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain