Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene202560 SustainPine v3.0 346
• AutoFact: Unassigned protein 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene202775 SustainPine v3.0 329
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene203638 SustainPine v3.0 338
• AutoFact: RING-H2 finger protein ATL47 n=2 Tax=Arabidopsis RepID=ATL47_ARATH 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene204038 SustainPine v3.0 289
• AutoFact: Unassigned protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene204073 SustainPine v3.0 366
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.991e-13
C-terminus
sp_v3.0_unigene204192 SustainPine v3.0 382
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAB81584.1| putative protein [Arabidopsis thaliana] dbj|BAD43130.1| putative protein [Arabidopsis thaliana] gb|AEE77792.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene206287 SustainPine v3.0 470
• AutoFact: V-type proton ATPase subunit G n=1 Tax=Citrus limon RepID=VATG_CITLI 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Vacuolar ATP synthase subunit G plant, putative 2.203e-12
N-terminus
sp_v3.0_unigene206335 SustainPine v3.0 394
• AutoFact: Vacuolar ATP synthase subunit G plant, putative n=1 Tax=Ricinus communis RepID=B9SUA9_RICCO 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Vacuolar ATP synthase subunit G plant, putative 2.823e-12
N-terminus
sp_v3.0_unigene206357 SustainPine v3.0 398
• AutoFact: Unassigned protein 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene206584 SustainPine v3.0 515
• AutoFact: RVT_2 domain containing protein 8.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.432e-10
Putative C-terminus
sp_v3.0_unigene206619 SustainPine v3.0 513
• AutoFact: Unassigned protein 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206680 SustainPine v3.0 383
• AutoFact: Vacuolar ATP synthase subunit G plant, putative n=1 Tax=Ricinus communis RepID=B9SUA9_RICCO 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Vacuolar ATP synthase subunit G plant, putative 3.401e-08
N-terminus
sp_v3.0_unigene206708 SustainPine v3.0 868
• AutoFact: brassinosteroid-responsive RING-H2 [Arabidopsis thaliana] ref|XP_002878382.1| brassinosteroid-responsive ring-H2 [Arabidopsis lyrata subsp. lyrata] gb|AAD27870.1|AF134155_1 BRH1 RING finger protein [Arabidopsis thaliana] emb|CAB71076.1| RING finger protei 1.0e-22
• FL-Next: sp=E3 ubiquitin-protein ligase RHA1B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene206919 SustainPine v3.0 286
• AutoFact: Anaphase-promoting complex subunit 11 n=8 Tax=Magnoliophyta RepID=APC11_ARATH 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene207758 SustainPine v3.0 598
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S9C1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein binding protein, putative 1.972e-09
Putative C-terminus
sp_v3.0_unigene207863 SustainPine v3.0 438
• AutoFact: zinc transporter, putative [Asparagus officinalis] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative zinc transporter 7.889e-17
Internal
sp_v3.0_unigene208025 SustainPine v3.0 245
• AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 3.0e-16
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene208454 SustainPine v3.0 481
• AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene208530 SustainPine v3.0 766
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene208567 SustainPine v3.0 460
• AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 3.0e-15
• FL-Next: tr=cDNA clone:J013028F14, full insert sequence; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain