Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: isoprenoid biosynthetic process

Term: GO:0008299  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene63414 SustainPine v3.0 181
AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene68659 SustainPine v3.0 246
AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 0.0
C-terminus
sp_v3.0_unigene69646 SustainPine v3.0 229
AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 8.716e-13
C-terminus
sp_v3.0_unigene73476 SustainPine v3.0 409
AutoFact: isoprenoid biosynthesis-related protein [Cryptococcus neoformans var. neoformans JEC21] ref|XP_775178.1| hypothetical protein CNBE4510 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL20531.1| hypothetical protein CNBE4510 [Cryptococcus neoformans 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Farnesyl pyrophosphate synthase 1.186e-39
Internal
sp_v3.0_unigene73697 SustainPine v3.0 413
AutoFact: isopentenyl-diphosphate Delta-isomerase [Coprinopsis cinerea okayama7#130] gb|EAU93097.1| isopentenyl-diphosphate Delta-isomerase [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Isopentenyl diphosphate isomerase; Pinus taeda (Loblolly pine). 0.0
Sma3: Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase 3.983e-24
Putative C-terminus
sp_v3.0_unigene74396 SustainPine v3.0 405
AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene74707 SustainPine v3.0 295
AutoFact: 3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Zea mays RepID=HMDH_MAIZE 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene74970 SustainPine v3.0 295
AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene76283 SustainPine v3.0 342
AutoFact: 3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Zea mays RepID=HMDH_MAIZE 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Misassembled
sp_v3.0_unigene76808 SustainPine v3.0 253
AutoFact: hydroxymethylglutaryl-CoA reductase (NADPH) [Cryptococcus neoformans var. neoformans JEC21] gb|AAW44143.1| hydroxymethylglutaryl-CoA reductase (NADPH), putative [Cryptococcus neoformans var. neoformans JEC21] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 4.597e-40
Internal
sp_v3.0_unigene76955 SustainPine v3.0 312
AutoFact: hydroxymethylglutaryl-CoA reductase [Coprinopsis cinerea okayama7#130] gb|EAU81445.1| hydroxymethylglutaryl-CoA reductase [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Internal
sp_v3.0_unigene77082 SustainPine v3.0 141
AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 0.0
Internal
sp_v3.0_unigene77645 SustainPine v3.0 359
AutoFact: Acetyl-CoA C-acetyltransferase [Psychroflexus torquis ATCC 700755] gb|EAS71864.1| Acetyl-CoA C-acetyltransferase [Psychroflexus torquis ATCC 700755] 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acetyl-CoA acetyltransferase, cytosolic 1 1.042e-12
Internal
sp_v3.0_unigene77756 SustainPine v3.0 434
AutoFact: Farnesyl diphosphate synthase 4 n=2 Tax=Picea RepID=B1A9K8_PICAB 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Farnesyl pyrophosphate synthase 6.598e-36
Putative C-terminus
sp_v3.0_unigene78696 SustainPine v3.0 174
AutoFact: 3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Taxus x media RepID=Q6WP38_9CONI 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 8.387e-08
Internal
sp_v3.0_unigene79744 SustainPine v3.0 189
AutoFact: hydroxymethylglutaryl-CoA synthase [Coprinopsis cinerea okayama7#130] gb|EAU90443.1| hydroxymethylglutaryl-CoA synthase [Coprinopsis cinerea okayama7#130] 1.0e-16
FL-Next: tr=3-hydroxy-3-methylglutaryl-CoA-synthase; Pinus sylvestris (Scots pine). 0.0
Sma3: Hydroxymethylglutaryl-CoA synthase 7.077e-23
Internal
sp_v3.0_unigene80309 SustainPine v3.0 349
AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Geranyl diphosphate synthase 1.117e-11
C-terminus
sp_v3.0_unigene80577 SustainPine v3.0 290
AutoFact: Geranyl diphosphate synthase 2 n=1 Tax=Picea abies RepID=B1A9K6_PICAB 6.0e-36
FL-Next: tr=Geranyl diphosphate synthase 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Geranylgeranyl pyrophosphate synthase 0.0
Internal
sp_v3.0_unigene80782 SustainPine v3.0 256
AutoFact: DUF707 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lysine ketoglutarate reductase trans-splicing related 1 5.114e-19
Internal
sp_v3.0_unigene97715 SustainPine v3.0 1232
AutoFact: 3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Salvia miltiorrhiza RepID=B3V4Z5_SALMI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxy-3-methylglutaryl coenzyme A reductase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain